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cg1_0.2_scaffold_955_c

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_955_c_1
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..559
DNA (558bp) protein (186aa)
Tax=CG_Rhodof_04
cg1_0.2_scaffold_955_c_2
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1151..1468)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XW06_ALCXX rbh
FIG00954026: hypothetical protein Tax=CG_Rhodof_04
predicted transcriptional regulator
cg1_0.2_scaffold_955_c_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1440..1823)
DNA (384bp) protein (128aa)
Toxin n=1 Tax=Pseudomonas chlororaphis subsp. aurantiaca PB-St2 RepID=V8DH59_9PSED rbh
higB-2; toxin HigB-2 Tax=CG_Rhodof_04
higB-2; cytotoxic translational repressor of toxin-antitoxin stability system
cg1_0.2_scaffold_955_c_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2391..2807)
DNA (417bp) protein (139aa)
Ribonuclease VapC n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SI98_9BURK
PilT protein domain-containing protein Tax=CG_Rhodof_04
PilT protein domain-containing protein
cg1_0.2_scaffold_955_c_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2804..3049)
DNA (246bp) protein (82aa)
UPI0003CE8E79 related cluster n=1 Tax=unknown RepID=UPI0003CE8E79
transcriptional regulator/antitoxin MazE; K07172 antitoxin Tax=CG_Rhodof_04
transcriptional regulator/antitoxin MazE
cg1_0.2_scaffold_955_c_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3223..3861)
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SG29_GALCS rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_955_c_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3963..4310)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Bartonella bovis 91-4 RepID=N6UF38_9RHIZ rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_955_c_8
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4291..4587)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Candidatus Regiella insecticola R5.15 RepID=G2H236_9ENTR rbh
hypothetical protein; K09803 hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_955_c_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4843..5991)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CYB8_9BACT rbh
hypothetical protein; K07133 Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_955_c_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6159..7469)
DNA (1311bp) protein (437aa)
glutamate-1-semialdehyde aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=CG_Rhodof_04
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=GSA_RHOFD rbh
glutamate-1-semialdehyde aminotransferase
cg1_0.2_scaffold_955_c_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7466..7609)
DNA (144bp) protein (48aa)
Tax=CG_Rhodof_04
cg1_0.2_scaffold_955_c_12
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7633..7785
DNA (153bp) protein (51aa)
rubredoxin n=1 Tax=Caldimonas manganoxidans RepID=UPI00036BB924 rbh
rubredoxin-type Fe(Cys)4 protein
rubredoxin-type Fe(Cys)4 protein Tax=GWE1_Burkholderiales_65_30_curated
cg1_0.2_scaffold_955_c_13
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7826..8227
DNA (402bp) protein (134aa)
Twitching motility two-component system response regulator PilG n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N7D0_9BURK rbh
pilG; twitching motility two-component system response regulator PilG Tax=CG_Rhodof_04
pilG; twitching motility two-component system response regulator PilG
cg1_0.2_scaffold_955_c_14
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8224..8589
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y7P8_9BURK rbh
response regulator receiver domain-containing protein; K02658 twitching motility two-component system response regulator PilH Tax=CG_Rhodof_04
response regulator receiver domain-containing protein
cg1_0.2_scaffold_955_c_15
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8685..9131
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003732998 rbh
CheW protein; K02659 twitching motility protein PilI Tax=CG_Rhodof_04
CheW protein
cg1_0.2_scaffold_955_c_16
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9153..11405
DNA (2253bp) protein (751aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YP5_RHOFD rbh
methyl-accepting chemotaxis sensory transducer; K02660 twitching motility protein PilJ Tax=CG_Rhodof_04
methyl-accepting chemotaxis sensory transducer
cg1_0.2_scaffold_955_c_17
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11442..16430
DNA (4989bp) protein (1663aa)
CheA signal transduction histidine kinase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GFX3_ALIDK rbh
response regulator receiver; K02487 type IV pili sensor histidine kinase and response regulator; K06596 chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) Tax=CG_Rhodof
CheA signal transduction histidine kinase
cg1_0.2_scaffold_955_c_18
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16403..17911)
DNA (1509bp) protein (503aa)
deoxyribodipyrimidine photolyase (EC:4.1.99.3); K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] Tax=CG_Rhodof_04
deoxyribodipyrimidine photolyase (EC:4.1.99.3)
Deoxyribodipyrimidine photo-lyase type I n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YP3_RHOFD rbh
cg1_0.2_scaffold_955_c_19
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17927..18526
DNA (600bp) protein (200aa)
UPF0301 protein Rfer_1377 n=2 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Y1377_RHOFD rbh
hypothetical protein; K07735 putative transcriptional regulator Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_955_c_20
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18581..18979
DNA (399bp) protein (133aa)
Holliday junction resolvase-like protein; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=CG_Rhodof_04
Putative Holliday junction resolvase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RUVX_RHOFD rbh
Holliday junction resolvase-like protein
cg1_0.2_scaffold_955_c_21
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18976..19473
DNA (498bp) protein (166aa)
phosphoribosyltransferase; K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=CG_Rhodof_04
Phosphoribosyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YP0_RHOFD rbh
phosphoribosyltransferase
cg1_0.2_scaffold_955_c_22
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19476..20438
DNA (963bp) protein (321aa)
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=CG_Rhodof_04
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=PYRB_RHOFD rbh
cg1_0.2_scaffold_955_c_23
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20698..22005
DNA (1308bp) protein (436aa)
amidohydrolase; K01465 dihydroorotase [EC:3.5.2.3] Tax=CG_Rhodof_04
Dihydroorotase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YN8_RHOFD rbh
amidohydrolase
cg1_0.2_scaffold_955_c_24
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22017..23396)
DNA (1380bp) protein (460aa)
ribulose bisphosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] Tax=CG_Rhodof_04
ribulose bisphosphate carboxylase (EC:4.1.1.39)
Ribulose bisphosphate carboxylase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RBL2_RHOFD rbh
Type II ajprobst (7/4/15)
cg1_0.2_scaffold_955_c_25
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23660..23851
DNA (192bp) protein (64aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3) Tax=CG_Rhodof_04
Signal transduction histidine kinase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRY0_9BURK
PAS domain S-box
cg1_0.2_scaffold_955_c_26
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23884..24969)
DNA (1086bp) protein (362aa)
Conserved hypothetical cytosolic protein n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZLA7_THASP
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_955_c_27
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24984..25751
DNA (768bp) protein (256aa)
Cobyrinic acid a,c-diamide synthase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221T3_RHOFD rbh
cobyrinic acid a,c-diamide synthase; K03496 chromosome partitioning protein Tax=CG_Rhodof_04
cobyrinic acid a,c-diamide synthase
cg1_0.2_scaffold_955_c_28
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25851..31145
DNA (5295bp) protein (1765aa)
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=CG_Rhodof_04
excinuclease ABC subunit A
Displaying 28 items

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