ggKbase home page

cg1_0.2_scaffold_1598_c

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_1598_c_1
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124..801)
DNA (678bp) protein (226aa)
Uncharacterized membrane protein PA4757 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA63_9BURK rbh
leucine export protein LeuE; K11250 leucine efflux protein Tax=CG_Rhodof_04
leucine export protein LeuE
cg1_0.2_scaffold_1598_c_2
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(798..1985)
DNA (1188bp) protein (396aa)
carbamoyl phosphate synthase small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=CG_Rhodof_04
carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WX4_RHOFD rbh
cg1_0.2_scaffold_1598_c_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2152..2931)
DNA (780bp) protein (260aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WX5_RHOFD rbh
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family Tax=CG_Rhodof_04
tRNA/rRNA methyltransferase SpoU
cg1_0.2_scaffold_1598_c_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3047..3757)
DNA (711bp) protein (237aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=CG_Rhodof_04
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RNH2_RHOFD rbh
cg1_0.2_scaffold_1598_c_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3729..4940)
DNA (1212bp) protein (404aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=CG_Rhodof_04
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=LPXB_RHOFD rbh
cg1_0.2_scaffold_1598_c_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5318..6112)
DNA (795bp) protein (265aa)
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] Tax=CG_Rhodof_04
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=uncultured bacterium RepID=K2DYG9_9BACT rbh
cg1_0.2_scaffold_1598_c_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6123..6560)
DNA (438bp) protein (146aa)
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-] Tax=CG_Rhodof_04
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=uncultured bacterium RepID=K2EK10_9BACT rbh
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
cg1_0.2_scaffold_1598_c_8
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6571..7575)
DNA (1005bp) protein (335aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=CG_Rhodof_04
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=LPXD_RHOFD rbh
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
cg1_0.2_scaffold_1598_c_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7600..8112)
DNA (513bp) protein (171aa)
Outer membrane protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N789_9BURK rbh
outer membrane protein Tax=CG_Rhodof_04
outer membrane protein
cg1_0.2_scaffold_1598_c_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8112..10418)
DNA (2307bp) protein (769aa)
Outer membrane protein assembly factor BamA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WY2_RHOFD rbh
surface antigen (D15); K07277 outer membrane protein Tax=CG_Rhodof_04
surface antigen (D15)
cg1_0.2_scaffold_1598_c_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10449..11807)
DNA (1359bp) protein (453aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=CG_Rhodof_04
zinc metalloprotease n=1 Tax=Acidovorax avenae RepID=UPI00031BC379 rbh
membrane-associated zinc metalloprotease
cg1_0.2_scaffold_1598_c_12
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11820..13031)
DNA (1212bp) protein (404aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=CG_Rhodof_04
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WY4_RHOFD rbh
cg1_0.2_scaffold_1598_c_13
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13040..13885)
DNA (846bp) protein (282aa)
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=CG_Rhodof_04
Phosphatidate cytidylyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WY5_RHOFD rbh
phosphatidate cytidylyltransferase
cg1_0.2_scaffold_1598_c_14
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13908..14621)
DNA (714bp) protein (238aa)
UDP diphosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=CG_Rhodof_04
UDP diphosphate synthase (EC:2.5.1.31)
UDP diphosphate synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036B2FF6 rbh
cg1_0.2_scaffold_1598_c_15
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14628..15188)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RRF_RHOFD rbh
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=CG_Rhodof_04
frr; ribosome recycling factor
cg1_0.2_scaffold_1598_c_16
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15236..15958)
DNA (723bp) protein (241aa)
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=CG_Rhodof_04
Uridylate kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=PYRH_RHOFD rbh
pyrH; uridylate kinase
cg1_0.2_scaffold_1598_c_17
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15999..16922)
DNA (924bp) protein (308aa)
Elongation factor Ts n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA44_9BURK rbh
tsf; elongation factor Ts; K02357 elongation factor Ts Tax=CG_Rhodof_04
tsf; elongation factor Ts
cg1_0.2_scaffold_1598_c_18
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17011..17763)
DNA (753bp) protein (251aa)
30S ribosomal protein S2 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA43_9BURK rbh
similar to ribosomal protein S2 Tax=CG_Rhodof_04
rpsB; 30S ribosomal protein S2
cg1_0.2_scaffold_1598_c_19
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18044..18931
DNA (888bp) protein (296aa)
Beta-lactamase-like n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WZ3_RHOFD rbh
beta-lactamase-like protein Tax=CG_Rhodof_04
beta-lactamase-like protein
cg1_0.2_scaffold_1598_c_20
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19037..20395
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WZ4_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1598_c_21
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20392..21153)
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21X01_RHOFD rbh
short-chain dehydrogenase/reductase SDR Tax=CG_Rhodof_04
short-chain dehydrogenase/reductase SDR
cg1_0.2_scaffold_1598_c_22
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21178..23415)
DNA (2238bp) protein (746aa)
ribonuclease R (EC:3.1.13.1); K12573 ribonuclease R [EC:3.1.-.-] Tax=CG_Rhodof_04
ribonuclease R (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21X02_RHOFD rbh
Displaying 22 items

View Taxonomy