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cg1_0.2_scaffold_79_c

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_79_c_1
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3..257)
DNA (255bp) protein (85aa)
50S ribosomal protein L13 n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=RL13_POLNA rbh
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
rplM; 50S ribosomal protein L13
cg1_0.2_scaffold_79_c_2
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

511..1404
DNA (894bp) protein (298aa)
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220T3_RHOFD rbh
hypothetical protein; K07115 Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_79_c_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1610..2251)
DNA (642bp) protein (214aa)
DSBA oxidoreductase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VJH3_POLNA rbh
DSBA oxidoreductase Tax=CG_Rhodof_04
DSBA oxidoreductase
cg1_0.2_scaffold_79_c_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2258..2536)
DNA (279bp) protein (93aa)
Fe-S oxidoreductase n=1 Tax=Cupriavidus sp. WS RepID=UPI000365CBF2 rbh
putative Fe-S protein; K06938 Tax=CG_Rhodof_04
putative Fe-S protein
cg1_0.2_scaffold_79_c_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2536..3051)
DNA (516bp) protein (172aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VJH2_POLNA rbh
YbaK/prolyl-tRNA synthetase associated domain-containing protein Tax=CG_Rhodof_04
YbaK/prolyl-tRNA synthetase associated domain-containing protein
cg1_0.2_scaffold_79_c_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3038..3961)
DNA (924bp) protein (308aa)
pyruvate carboxyltransferase; K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] Tax=CG_Rhodof_04
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RT0_RHOFD rbh
pyruvate carboxyltransferase
cg1_0.2_scaffold_79_c_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4090..5004
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQK8_9BURK rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_79_c_8
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5001..6911)
DNA (1911bp) protein (637aa)
signal transduction protein Tax=CG_Rhodof_04
putative signal transduction protein id=12550431 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
predicted signal-transduction protein containing cAMP-binding and CBS domains
cg1_0.2_scaffold_79_c_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6892..7356)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221A9_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_79_c_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7384..8241)
DNA (858bp) protein (286aa)
HAD-superfamily hydrolase subfamily IIB n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221A8_RHOFD rbh
HAD family hydrolase; K07024 Tax=CG_Rhodof_04
HAD family hydrolase
cg1_0.2_scaffold_79_c_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8255..9886)
DNA (1632bp) protein (544aa)
Peptide chain release factor 3 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221A7_RHOFD rbh
prfC; peptide chain release factor 3; K02837 peptide chain release factor 3 Tax=CG_Rhodof_04
prfC; peptide chain release factor 3
cg1_0.2_scaffold_79_c_12
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9905..10213)
DNA (309bp) protein (103aa)
Plasmid stabilization system n=1 Tax=Thauera phenylacetica B4P RepID=N6YMG9_9RHOO rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_79_c_13
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10210..10458)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4Q1G5_9CAUL
addiction module antidote protein, CC2985 family Tax=CG_Rhodof_04
addiction module antidote protein, CC2985 family
cg1_0.2_scaffold_79_c_14
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10618..12279
DNA (1662bp) protein (554aa)
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; K01835 phosphoglucomutase [EC:5.4.2.2] Tax=CG_Rhodof_04
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZR9_THIK1 rbh
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
cg1_0.2_scaffold_79_c_15
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12325..13596
DNA (1272bp) protein (424aa)
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27); K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] Tax=CG_Rhodof_04
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
glucose-1-phosphate adenylyltransferase n=1 Tax=Curvibacter lanceolatus RepID=UPI000378144F rbh
cg1_0.2_scaffold_79_c_16
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13616..15064
DNA (1449bp) protein (483aa)
Glycogen synthase n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N7N2_9BURK rbh
glgA; glycogen synthase Tax=CG_Rhodof_04
glgA; glycogen synthase
cg1_0.2_scaffold_79_c_17
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15239..16732
DNA (1494bp) protein (498aa)
4-alpha-glucanotransferase n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N8A8_9BURK rbh
malQ; 4-alpha-glucanotransferase Tax=CG_Rhodof_04
malQ; 4-alpha-glucanotransferase
cg1_0.2_scaffold_79_c_18
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16825..19536)
DNA (2712bp) protein (904aa)
E1-E2 type ATPase; K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=CG_Rhodof_04
ATPase, E1-E2 type n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XV8_RHOFD rbh
E1-E2 type ATPase
cg1_0.2_scaffold_79_c_19
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19566..21674)
DNA (2109bp) protein (703aa)
Glycogen metabolism protein GlgX n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N8A4_9BURK rbh
glgX; glycogen metabolism protein GlgX Tax=CG_Rhodof_04
glgX; glycogen metabolism protein GlgX rbh
cg1_0.2_scaffold_79_c_20
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21662..23851)
DNA (2190bp) protein (730aa)
glgB; 1,4-alpha-glucan branching enzyme GlgB (EC:2.4.1.18); K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] Tax=CG_Rhodof_04
glgB; 1,4-alpha-glucan branching enzyme GlgB (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HTB1_RUBGI rbh
cg1_0.2_scaffold_79_c_21
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23864..26335)
DNA (2472bp) protein (824aa)
glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1] Tax=CG_Rhodof_04
glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VL94_POLNA rbh
cg1_0.2_scaffold_79_c_22
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26374..26970)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000382D319 rbh
lysine exporter protein LysE/YggA; K06895 L-lysine exporter family protein LysE/ArgO Tax=CG_Rhodof_04
lysine exporter protein LysE/YggA
cg1_0.2_scaffold_79_c_23
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26980..28401)
DNA (1422bp) protein (474aa)
sensor histidine kinase; K07645 two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] Tax=CG_Rhodof_04
ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47C85_DECAR rbh
sensor histidine kinase
cg1_0.2_scaffold_79_c_24
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28437..29099)
DNA (663bp) protein (221aa)
Response regulator receiver:Transcriptional regulatory protein, C-terminal n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47C86_DECAR
response regulator receiver:transcriptional regulatory protein, C-terminal; K02483 two-component system, OmpR family, response regulator Tax=CG_Rhodof_04
response regulator receiver:transcriptional regulatory protein, C-terminal
cg1_0.2_scaffold_79_c_25
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29093..29527)
DNA (435bp) protein (145aa)
CinA domain protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VTI5_POLNA rbh
CinA domain-containing protein; K03743 Tax=CG_Rhodof_04
CinA domain-containing protein
cg1_0.2_scaffold_79_c_26
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29618..30160)
DNA (543bp) protein (181aa)
phosphatidylglycerophosphatase A; K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] Tax=CG_Rhodof_04
Phosphatidylglycerophosphatase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q223J8_RHOFD rbh
phosphatidylglycerophosphatase A
cg1_0.2_scaffold_79_c_27
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30361..31086
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NCR1_9BURK rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_79_c_28
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31126..32124)
DNA (999bp) protein (333aa)
thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=CG_Rhodof_04
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VTI3_POLNA rbh
cg1_0.2_scaffold_79_c_29
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32117..34141)
DNA (2025bp) protein (675aa)
Putative site-specific recombinase transmembrane protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221M2_RHOFD rbh
putative site-specific recombinase transmembrane protein Tax=CG_Rhodof_04
putative site-specific recombinase transmembrane protein
cg1_0.2_scaffold_79_c_30
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34169..34570)
DNA (402bp) protein (134aa)
Protein ApaG n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221M1_RHOFD rbh
apaG; ApaG protein; K06195 ApaG protein Tax=CG_Rhodof_04
apaG; ApaG protein
Displaying items 1-30 of 85 in total

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