ggKbase home page

cg1_0.2_scaffold_1733_c

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_1733_c_1
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

2..223
DNA (222bp) protein (74aa)
Tax=CG_Pacearch_06
cg1_0.2_scaffold_1733_c_2
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

277..1560
DNA (1284bp) protein (428aa)
ftsY; signal recognition particle receptor FtsY; K03110 fused signal recognition particle receptor Tax=CG_Pacearch_03
Signal recognition particle GTPase
cg1_0.2_scaffold_1733_c_3
unknown

Not on your lists

comp(1563..1964)
DNA (402bp) protein (134aa)

This feature has no annotations

cg1_0.2_scaffold_1733_c_4
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


2170..5295
DNA (3126bp) protein (1042aa)
SRP54-type protein, GTPase domain n=1 Tax=sediment metagenome RepID=D9PEV7_9ZZZZ rbh
GTP-binding signal recognition particle SRP54 G-domain-containing protein; K03106 signal recognition particle subunit SRP54 Tax=CG_Pacearch_03
SRP54-type protein, GTPase protein
cg1_0.2_scaffold_1733_c_5
unknown

Not on your lists

5334..5771
DNA (438bp) protein (146aa)

This feature has no annotations

cg1_0.2_scaffold_1733_c_6
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

5805..6299
DNA (495bp) protein (165aa)
nuclease (SNase-like) Tax=CG_Pacearch_04
nuclease (SNase domain protein)
cg1_0.2_scaffold_1733_c_7
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

6357..6671
DNA (315bp) protein (105aa)
hypothetical protein Tax=RBG_16_Micrarchaeota_49_10_curated
hypothetical protein
cg1_0.2_scaffold_1733_c_8

Not on your lists

6652..6975
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GWJ0_9EURY rbh
Marine sediment metagenome DNA, contig: S01H1_S13646 {ECO:0000313|EMBL:GAG08298.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
cg1_0.2_scaffold_1733_c_9
unknown

Not on your lists

comp(7000..7617)
DNA (618bp) protein (206aa)

This feature has no annotations

cg1_0.2_scaffold_1733_c_10
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

7714..8511
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376930F rbh
hypothetical protein
Tax=AR19
cg1_0.2_scaffold_1733_c_11
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

8616..8933
DNA (318bp) protein (106aa)
Tax=AR19
cg1_0.2_scaffold_1733_c_12
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

8935..9309
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNC0_METZD rbh
hypothetical protein Tax=AR19
hypothetical protein
cg1_0.2_scaffold_1733_c_13
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

Not on your lists

9373..10050
DNA (678bp) protein (226aa)
UPF0758 protein Paes_0735 n=1 Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=Y735_PROA2 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKP30759.1}; TaxID=1618806 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
radC; DNA repair protein RadC
cg1_0.2_scaffold_1733_c_14
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(10043..11542)
DNA (1500bp) protein (500aa)
N-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=CG_Pacearch_02
N-6 DNA methylase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D6M3_METSW rbh
N-6 DNA methylase
cg1_0.2_scaffold_1733_c_15
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11544..12971)
DNA (1428bp) protein (476aa)
divergent AAA ATP Tax=AR4
divergent AAA ATP
cg1_0.2_scaffold_1733_c_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(13228..13587)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003754E35 rbh
hypothetical protein
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
cg1_0.2_scaffold_1733_c_17
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

comp(13589..14110)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035ECC8C rbh
GntR family transcriptional regulator Tax=GWA1_OD1_36_12
cg1_0.2_scaffold_1733_c_18
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14107..15261)
DNA (1155bp) protein (385aa)
Type I restriction-modification system, specificity subunit S {ECO:0000313|EMBL:AKB36697.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AKB36697.1};; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia;
hsdS3; type I restriction enzyme, S subunit (EC:3.1.21.3)
Type I restriction enzyme, S subunit n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LJJ2_METBM rbh
cg1_0.2_scaffold_1733_c_19
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

Not on your lists

comp(15258..15884)
DNA (627bp) protein (209aa)
hypothetical protein Tax=GWA2_OD1_31_28_partial
cg1_0.2_scaffold_1733_c_20
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(15881..16789)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NW30_GRAMM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEU35450.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC B
cg1_0.2_scaffold_1733_c_21
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(16786..18036)
DNA (1251bp) protein (417aa)
hypothetical protein Tax=CG_Pacearch_04
cg1_0.2_scaffold_1733_c_22
unknown

Not on your lists

comp(18029..18220)
DNA (192bp) protein (64aa)

This feature has no annotations

cg1_0.2_scaffold_1733_c_23

Not on your lists

comp(18214..18678)
DNA (465bp) protein (155aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO53205.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
cg1_0.2_scaffold_1733_c_24
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(18675..18881)
DNA (207bp) protein (69aa)
Tax=CG_Pacearch_02
cg1_0.2_scaffold_1733_c_25
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18953..19309)
DNA (357bp) protein (119aa)
UPI0003D1B6B3 related cluster n=1 Tax=unknown RepID=UPI0003D1B6B3 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETA68250.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tinda
cg1_0.2_scaffold_1733_c_26
unknown

Not on your lists

comp(19285..19590)
DNA (306bp) protein (102aa)

This feature has no annotations

cg1_0.2_scaffold_1733_c_27
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(19592..22336)
DNA (2745bp) protein (915aa)
Type I site-specific deoxyribonuclease (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=CG_Pacearch_02
Type I site-specific deoxyribonuclease (EC:3.1.21.3)
Type I site-specific deoxyribonuclease n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D6L9_METSW rbh
cg1_0.2_scaffold_1733_c_28
unknown

Not on your lists

comp(22407..22592)
DNA (186bp) protein (62aa)

This feature has no annotations

cg1_0.2_scaffold_1733_c_29
unknown

Not on your lists

22707..22856
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 29 items

View Taxonomy