ggKbase home page

cg_0.2_sub10_scaffold_710_c

Search features with annotation key words

Displaying 29 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_710_c_1
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

1..987
DNA (987bp) protein (329aa)
tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] Tax=CG_GN02-01
Tyrosyl-tRNA synthetase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J284_9BACL id=124232 bin=ACD78 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
tyrosyl-tRNA synthetase
cg_0.2_sub10_scaffold_710_c_2
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

1188..2414
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G3Z6_9BACT rbh
putative cysteine desulfurase Tax=CG_GN02-01
putative cysteine desulfurase
cg_0.2_sub10_scaffold_710_c_3
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

2453..2866
DNA (414bp) protein (138aa)
NifU family SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins Tax=CG_GN02-01
SUF system FeS assembly protein, NifU family; K04488 nitrogen fixation protein NifU and related proteins id=123996 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
SUF system FeS assembly protein, NifU family
cg_0.2_sub10_scaffold_710_c_4
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(3322..3519)
DNA (198bp) protein (66aa)
periplasmic sensor signal transduction histidine kinase Tax=CG_GN02-01
periplasmic sensor signal transduction histidine kinase id=123995 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg_0.2_sub10_scaffold_710_c_5
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(3574..3846)
DNA (273bp) protein (91aa)
Tax=CG_GN02-01
cg_0.2_sub10_scaffold_710_c_6
unknown

Not on your lists

comp(3922..4167)
DNA (246bp) protein (82aa)

This feature has no annotations

cg_0.2_sub10_scaffold_710_c_7
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(4270..4521)
DNA (252bp) protein (84aa)
Tax=CG_GN02-01
cg_0.2_sub10_scaffold_710_c_8
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(4659..5195)
DNA (537bp) protein (179aa)
Two-component response regulator n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GSF7_9BACT rbh
two component transcriptional regulator, winged helix family Tax=CG_GN02-01
two component transcriptional regulator, winged helix family
cg_0.2_sub10_scaffold_710_c_9
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(5320..6123)
DNA (804bp) protein (268aa)
coiled-coil 482..503 Tax=CG_GN02-01
coiled-coil 482..503 id=123692 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg_0.2_sub10_scaffold_710_c_10
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(6154..6819)
DNA (666bp) protein (222aa)
EmrB/QacA subfamily drug resistance transporter Tax=CG_GN02-01
coiled-coil 482..503 id=123692 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Rhs element Vgr family protein
cg_0.2_sub10_scaffold_710_c_11
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(7203..7454)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Melittangium lichenicola RepID=Q70PA6_9DELT id=123691 bin=ACD78 species=Melittangium lichenicola genus=Melittangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein Tax=CG_GN02-01
Thiamin biosynthesis lipoprotein ApbE
cg_0.2_sub10_scaffold_710_c_12
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(7497..7826)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Melittangium lichenicola RepID=Q70PA6_9DELT id=123691 bin=ACD78 species=Melittangium lichenicola genus=Melittangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Putative uncharacterized protein Tax=CG_GN02-01
cg_0.2_sub10_scaffold_710_c_13
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(8072..8392)
DNA (321bp) protein (107aa)
dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=CG_GN02-01
dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] id=123697 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg_0.2_sub10_scaffold_710_c_14
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


comp(8708..8962)
DNA (255bp) protein (85aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=CG_GN02-01
dimethyladenosine transferase (EC:2.1.1.48); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] id=49662 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
cg_0.2_sub10_scaffold_710_c_15
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(8985..9191)
DNA (207bp) protein (69aa)
seg 77..88 Tax=CG_GN02-01
seg 77..88 id=123690 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg_0.2_sub10_scaffold_710_c_16
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(9213..9671)
DNA (459bp) protein (153aa)
seg 77..88 Tax=CG_GN02-01
seg 77..88 id=123690 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg_0.2_sub10_scaffold_710_c_17
unknown

Not on your lists

comp(9951..10115)
DNA (165bp) protein (55aa)
Small heat shock protein n=3 Tax=candidate division TM7 RepID=UPI00016B2686 Tax=ACD78
Small heat shock protein n=3 Tax=candidate division TM7 RepID=UPI00016B2686 id=123696 bin=ACD78 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg_0.2_sub10_scaffold_710_c_18
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(10218..10391)
DNA (174bp) protein (58aa)
Small heat shock protein n=3 Tax=candidate division TM7 RepID=UPI00016B2686 id=123696 bin=ACD78 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Small heat shock protein Tax=CG_GN02-01
cg_0.2_sub10_scaffold_710_c_19
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

10614..11117
DNA (504bp) protein (168aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XGD8_9BACT rbh
pilC; type IV pilus biogenesis protein PilC; K02653 type IV pilus assembly protein PilC Tax=CG_GN02-01
type II secretion system protein F
cg_0.2_sub10_scaffold_710_c_20
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

11118..11423
DNA (306bp) protein (102aa)
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=CG_GN02-01
type II secretion system protein; K02653 type IV pilus assembly protein PilC id=123695 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg_0.2_sub10_scaffold_710_c_21
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

11517..11726
DNA (210bp) protein (70aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XGD8_9BACT
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=CG_GN02-01
type II secretion system protein
cg_0.2_sub10_scaffold_710_c_22
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(12210..12407)
DNA (198bp) protein (66aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=CG_GN02-01
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] id=123985 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg_0.2_sub10_scaffold_710_c_23
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(12642..12827)
DNA (186bp) protein (62aa)
UPI0003D02B4C related cluster n=1 Tax=unknown RepID=UPI0003D02B4C
hypothetical protein
UPI0003D02B4C related cluster Tax=CG_GN02-01
cg_0.2_sub10_scaffold_710_c_24
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(12840..12977)
DNA (138bp) protein (46aa)
Tax=CG_GN02-01
cg_0.2_sub10_scaffold_710_c_25
unknown

Not on your lists

comp(13086..13178)
DNA (93bp) protein (31aa)

This feature has no annotations

cg_0.2_sub10_scaffold_710_c_26
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

comp(13185..13439)
DNA (255bp) protein (85aa)
ctpA; carboxyl-terminal processing protease (EC:3.4.21.102) Tax=CG_GN02-02
cg_0.2_sub10_scaffold_710_c_27
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(13853..15037)
DNA (1185bp) protein (395aa)
RNA binding S1 domain protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B22D3 id=123984 bin=ACD78 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
rpfA; 30S ribosomal protein S1 Tax=CG_GN02-01
RNA binding S1 protein
cg_0.2_sub10_scaffold_710_c_trna_1
unknown

Not on your lists

comp(15080..15153)
DNA (74bp)
transferRNA
cg_0.2_sub10_scaffold_710_c_28
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

15365..15697
DNA (333bp) protein (111aa)
hypothetical protein Tax=CG_GN02-01
hypothetical protein id=123791 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Displaying 29 items

View Taxonomy