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cg1_0.2_scaffold_1456_c

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_1456_c_1
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(3..2237)
DNA (2235bp) protein (745aa)
Tax=CG_CPR12_01
cg1_0.2_scaffold_1456_c_2
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

2593..3126
DNA (534bp) protein (178aa)
Tax=CG_CPR12_01
cg1_0.2_scaffold_1456_c_3
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(3176..3829)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B76AA9
hypothetical protein Tax=CG_CPR12_01
cg1_0.2_scaffold_1456_c_4
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(3841..4578)
DNA (738bp) protein (246aa)
transmembrane_regions Tax=CG_CPR12_01
transmembrane_regions id=5801439 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
cg1_0.2_scaffold_1456_c_5
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(4582..5259)
DNA (678bp) protein (226aa)
transmembrane_regions Tax=CG_CPR12_01
cg1_0.2_scaffold_1456_c_6
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(5348..6151)
DNA (804bp) protein (268aa)
Peptidase A24 N-terminal domain family; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=CG_CPR12_01
Type 4 prepilin-like proteins leader peptide-processing enzyme id=1889001 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
peptidase A24 N-terminal domain family protein
cg1_0.2_scaffold_1456_c_7
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(6380..6898)
DNA (519bp) protein (173aa)
putative General secretion pathway protein GspG Tax=CG_CPR12_01
hypothetical protein id=5801442 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
cg1_0.2_scaffold_1456_c_8
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(7180..8388)
DNA (1209bp) protein (403aa)
Tfp pilus biogenesis protein PilC; K02653 type IV pilus assembly protein PilC Tax=CG_CPR12_01
hypothetical protein id=5801443 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Tfp pilus biogenesis protein PilC
cg1_0.2_scaffold_1456_c_9
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(8427..9500)
DNA (1074bp) protein (358aa)
twitching motility protein; K02669 twitching motility protein PilT Tax=CG_CPR12_01
hypothetical protein id=5801444 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
twitching motility protein
cg1_0.2_scaffold_1456_c_10
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(9577..9957)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZF88_9BACT
hypothetical protein Tax=CG_CPR12_01
PAS/PAC sensor hybrid histidine kinase
cg1_0.2_scaffold_1456_c_11
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(10058..11800)
DNA (1743bp) protein (581aa)
type IV pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB Tax=CG_CPR12_01
hypothetical protein id=5801446 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
type IV pilus assembly protein PilB
cg1_0.2_scaffold_1456_c_12
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(11802..12815)
DNA (1014bp) protein (338aa)
PA14 domain-containing protein Tax=CG_CPR12_01
Fibronectin type III domain protein id=4789623 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
PA14 domain-containing protein
cg1_0.2_scaffold_1456_c_13
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(12827..13531)
DNA (705bp) protein (235aa)
Tax=CG_CPR12_01
cg1_0.2_scaffold_1456_c_14
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(13542..15389)
DNA (1848bp) protein (616aa)
transmembrane_regions 72..94 Tax=CG_CPR12_01
transmembrane_regions 72..94 id=53716 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
cg1_0.2_scaffold_1456_c_15
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(15408..16847)
DNA (1440bp) protein (480aa)
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=CG_CPR12_01
type IV pilus biogenesis protein PilM; K02662 type IV pilus assembly protein PilM id=56453 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
type IV pilus assembly protein PilM
cg1_0.2_scaffold_1456_c_16
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

16967..17524
DNA (558bp) protein (186aa)
LemA-like protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B255F id=130556 bin=ACD7 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
LemA family protein; K03744 LemA protein Tax=CG_CPR12_01
LemA family protein
cg1_0.2_scaffold_1456_c_17
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

17549..18433
DNA (885bp) protein (295aa)
htpX; membrane protease (EC:3.4.24.-) Tax=CG_CPR12_01
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI000365932E
hypothetical protein
cg1_0.2_scaffold_1456_c_18
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

18468..19703
DNA (1236bp) protein (412aa)
id=1889167 Tax=CG_CPR12_01
id=1889167 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
cg1_0.2_scaffold_1456_c_19
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

19706..20431
DNA (726bp) protein (242aa)
DSBA oxidoreductase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF76_9BACT
DSBA oxidoreductase Tax=CG_CPR12_01
DSBA oxidoreductase
cg1_0.2_scaffold_1456_c_20
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

20437..21762
DNA (1326bp) protein (442aa)
DNA repair protein RadA Tax=CG_CPR12_01
DNA repair protein radA id=1956585 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
DNA repair protein RadA
cg1_0.2_scaffold_1456_c_21
unknown

Not on your lists

comp(21909..22085)
DNA (177bp) protein (59aa)

This feature has no annotations

cg1_0.2_scaffold_1456_c_22
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(22331..24403)
DNA (2073bp) protein (691aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZJD7_9BACT
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:KKW14587.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
cg1_0.2_scaffold_1456_c_23
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(24673..25062)
DNA (390bp) protein (130aa)
Tax=CG_Nomura_04
Displaying 23 items

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