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cg_0.2_sub100_scaffold_3_c

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Displaying items 1-30 of 147 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub100_scaffold_3_c_1
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1..372
DNA (372bp) protein (124aa)
50S ribosomal protein L11 n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI0003615F8C
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=CG_Mariprof_05
50S ribosomal protein L11
cg_0.2_sub100_scaffold_3_c_2
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists


376..1065
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00035C9826
rplA; 50S ribosomal protein L1 Tax=CG_Mariprof_05
50S ribosomal protein L1
cg_0.2_sub100_scaffold_3_c_3
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1245..1760
DNA (516bp) protein (172aa)
50S ribosomal protein L10 n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00037A14F9
50S ribosomal protein L10p; K02864 large subunit ribosomal protein L10 Tax=CG_Mariprof_05
50S ribosomal protein L10p
cg_0.2_sub100_scaffold_3_c_4
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1811..2191
DNA (381bp) protein (127aa)
50S ribosomal protein L7/L12 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EVW8_9PROT
rplL; putative 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=CG_Mariprof_05
rplL; putative 50S ribosomal protein L7/L12
cg_0.2_sub100_scaffold_3_c_5
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2335..6438
DNA (4104bp) protein (1368aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=CG_Mariprof_05
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI000362D684
cg_0.2_sub100_scaffold_3_c_6
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6440..10582
DNA (4143bp) protein (1381aa)
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=CG_Mariprof_05
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00037A3051
DNA-directed RNA polymerase subunit beta'
cg_0.2_sub100_scaffold_3_c_7
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10662..11699
DNA (1038bp) protein (346aa)
rod shape-determining protein Mbl n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI0003686074
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=CG_Mariprof_05
rod shape-determining protein MreB
cg_0.2_sub100_scaffold_3_c_8
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11696..12487
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI000371220A
rod shape-determining protein Tax=CG_Mariprof_05
Cell shape-determining protein MreC
cg_0.2_sub100_scaffold_3_c_9
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12545..12910
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI00035F60AF
hypothetical protein Tax=CG_Mariprof_05
cg_0.2_sub100_scaffold_3_c_10
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12894..14669
DNA (1776bp) protein (592aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI00036D7318
mrdA; penicillin-binding protein 2; K05515 penicillin-binding protein 2 Tax=CG_Mariprof_05
mrdA; penicillin-binding protein 2
cg_0.2_sub100_scaffold_3_c_11
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14669..15772
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI00036462AF
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=CG_Mariprof_05
rod shape-determining protein RodA
cg_0.2_sub100_scaffold_3_c_12
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15776..16936)
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00037DC11C
major facilitator superfamily protein; K08227 MFS transporter, LPLT family, lysophospholipid transporter Tax=CG_Mariprof_05
major facilitator superfamily protein
cg_0.2_sub100_scaffold_3_c_13
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16943..19108)
DNA (2166bp) protein (722aa)
aas; 2-acylglycerophosphoethanolamine acyltransferase; K05939 acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] T
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI000369FEA7
aas; 2-acylglycerophosphoethanolamine acyltransferase
cg_0.2_sub100_scaffold_3_c_14
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19437..20717
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI000376B1C2
UDP-N-acetyl-D-mannosaminuronate dehydrogenase Tax=CG_Mariprof_05
UDP-N-acetyl-D-mannosaminuronate dehydrogenase
cg_0.2_sub100_scaffold_3_c_15
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20732..21850
DNA (1119bp) protein (373aa)
GDP-mannose 4,6-dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=CG_Mariprof_05
GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00036338DE
cg_0.2_sub100_scaffold_3_c_16
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21884..22774
DNA (891bp) protein (297aa)
NAD-dependent epimerase/dehydratase; K02377 GDP-L-fucose synthase [EC:1.1.1.271] Tax=CG_Mariprof_05
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000376242C
NAD-dependent epimerase/dehydratase
cg_0.2_sub100_scaffold_3_c_17
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22767..23936
DNA (1170bp) protein (390aa)
pyridoxamine 5-phosphate oxidase n=1 Tax=Amphritea japonica RepID=UPI000377652D
polysaccharide biosynthesis protein Tax=CG_Mariprof_05
polysaccharide biosynthesis protein
cg_0.2_sub100_scaffold_3_c_18
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24003..24551
DNA (549bp) protein (183aa)
Chloramphenicol acetyltransferase n=1 Tax=Pseudoalteromonas haloplanktis ANT/505 RepID=F3BFN9_PSEHA
hexapeptide repeat-containing transferase Tax=CG_Mariprof_05
Hypothetical protein
cg_0.2_sub100_scaffold_3_c_19
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24538..25554
DNA (1017bp) protein (339aa)
Tlr2314 protein n=1 Tax=Thermosynechococcus elongatus (strain BP-1) RepID=Q8DGK3_THEEB
hypothetical protein Tax=CG_Mariprof_05
hypothetical protein
cg_0.2_sub100_scaffold_3_c_20
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25541..26584
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DSS1_PSEFL
fucosyl transferase Tax=CG_Mariprof_05
fucosyl transferase
cg_0.2_sub100_scaffold_3_c_21
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26577..28028
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DRE4_PSEFL
polysaccharide biosynthesis protein Tax=CG_Mariprof_05
polysaccharide biosynthesis protein
cg_0.2_sub100_scaffold_3_c_22
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28021..28905
DNA (885bp) protein (295aa)
Glycosyl transferase family 11 n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQ93_SIDLE
glycosyl transferase family 11 Tax=CG_Mariprof_05
glycosyl transferase family 11
cg_0.2_sub100_scaffold_3_c_23
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28915..29850
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=unclassified Zetaproteobacteria RepID=UPI00035FB9F3
NAD-dependent epimerase/dehydratase Tax=CG_Mariprof_05
NAD-dependent epimerase/dehydratase
cg_0.2_sub100_scaffold_3_c_24
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29847..30800
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=unclassified Zetaproteobacteria RepID=UPI0003636AF6
Glycosyl transferase, group 2 family protein Tax=CG_Mariprof_05
glycosyl transferase, group 2 family protein
cg_0.2_sub100_scaffold_3_c_25
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30815..32158
DNA (1344bp) protein (448aa)
Tax=CG_Mariprof_05
cg_0.2_sub100_scaffold_3_c_26
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32098..32964
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037C0EAE
glycosyl transferase family 2 Tax=CG_Mariprof_05
glycosyl transferase family 2
cg_0.2_sub100_scaffold_3_c_27
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33036..34133
DNA (1098bp) protein (366aa)
Glycosyl transferases group 1-like protein (EC:2.4.1.56)
hypothetical protein n=1 Tax=Vibrio ordalii RepID=UPI000382730A
group 1 glycosyl transferase Tax=CG_Mariprof_05
cg_0.2_sub100_scaffold_3_c_28
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34185..35132
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=unclassified Zetaproteobacteria RepID=UPI0003746956
NAD-dependent epimerase/dehydratase Tax=CG_Mariprof_05
NAD-dependent epimerase/dehydratase
cg_0.2_sub100_scaffold_3_c_29
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35129..35692
DNA (564bp) protein (188aa)
Sugar transferases involved in lipopolysaccharide synthesis n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5TUV8_9GAMM
Sugar transferases involved in lipopolysaccharide synthesis Tax=CG_Mariprof_05
Sugar transferases involved in lipopolysaccharide synthesis
cg_0.2_sub100_scaffold_3_c_30
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35710..36243
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00037CB075
glycine cleavage system transcriptional repressor; K03567 glycine cleavage system transcriptional repressor Tax=CG_Mariprof_05
amino acid-binding ACT domain-containing regulatory protein
Displaying items 1-30 of 147 in total

View Taxonomy