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cg_0.2_sub10_scaffold_165_c

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Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_165_c_trna_1
unknown

Not on your lists

43..115
DNA (73bp)
transferRNA
cg_0.2_sub10_scaffold_165_c_1
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists


222..659
DNA (438bp) protein (146aa)
rplM2; ribosomal protein L13 Tax=CG_Nitrosp_01
50S ribosomal protein L13 id=4127919 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
rplM2; 50S ribosomal protein L13
cg_0.2_sub10_scaffold_165_c_2
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists


660..1052
DNA (393bp) protein (131aa)
rplI1; ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=CG_Nitrosp_01
30S ribosomal protein S9 id=4127920 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
rplI2; 30S ribosomal protein S9
cg_0.2_sub10_scaffold_165_c_3
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

1161..2201
DNA (1041bp) protein (347aa)
argC1; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=CG_Nitrosp_01
argC2; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase id=4127921 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_165_c_4
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

2325..2549
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KSZ9_9SYNC
hypothetical protein Tax=CG_Nitrosp_01
hypothetical protein
cg_0.2_sub10_scaffold_165_c_5
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

2584..2742
DNA (159bp) protein (53aa)
YcfA family protein n=1 Tax=Nostoc sp. PCC 7107 RepID=K9QD06_9NOSO
hypothetical protein Tax=CG_Nitrosp_01
hypothetical protein
cg_0.2_sub10_scaffold_165_c_6
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

2858..3862
DNA (1005bp) protein (335aa)
Putative TIM-barrel fold metal-dependent hydrolase Tax=CG_Nitrosp_01
Putative TIM-barrel fold metal-dependent hydrolase id=4127922 bin=GWF2_Nitrospirae_44_13 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_165_c_7
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(4094..4294)
DNA (201bp) protein (67aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=3900647 bin=GWF2_Ignavibacteria_35_20 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
cg_0.2_sub10_scaffold_165_c_8
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(4291..4536)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FU07_METHJ rbh
hypothetical protein Tax=CG_Nitrosp_02
hypothetical protein
cg_0.2_sub10_scaffold_165_c_9
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(4526..4837)
DNA (312bp) protein (104aa)
Tax=CG_Nitrosp_01
cg_0.2_sub10_scaffold_165_c_10
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(4951..5292)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PIH8_9ZZZZ
Putative uncharacterized protein Tax=CG_Nitrosp_01
cg_0.2_sub10_scaffold_165_c_11
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(5555..5953)
DNA (399bp) protein (133aa)
protein of unknown function DUF132 Tax=CG_Nitrosp_01
nucleic acid-binding protein id=24530418 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
protein of unknown function DUF132
cg_0.2_sub10_scaffold_165_c_12
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(5950..6168)
DNA (219bp) protein (73aa)
ribbon-helix-helix protein Tax=CG_Nitrosp_01
Transcriptional regulator, CopG family id=4253445 bin=GWC2_Deltaproteobacteria_42_51 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
ribbon-helix-helix protein
cg_0.2_sub10_scaffold_165_c_13
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(6263..7105)
DNA (843bp) protein (281aa)
nadC; nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] Tax=CG_Nitrosp_01
nadC; nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase id=4127923 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_165_c_14
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(7109..7594)
DNA (486bp) protein (162aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=4127924 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_165_c_15
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists


comp(7611..10331)
DNA (2721bp) protein (907aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=CG_Nitrosp_01
Valine--tRNA ligase id=4127925 bin=GWF2_Nitrospirae_44_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
valS; valyl-tRNA ligase
cg_0.2_sub10_scaffold_165_c_16
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(10333..11382)
DNA (1050bp) protein (350aa)
response regulator Tax=CG_Nitrosp_01
Response regulator id=4127926 bin=GWF2_Nitrospirae_44_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
response regulator
cg_0.2_sub10_scaffold_165_c_17
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

11675..12139
DNA (465bp) protein (155aa)
hydC; electron bifurcating hydrogenase subunit HydC (EC:1.12.1.3)
NADH-quinone oxidoreductase, E subunit Tax=CG_Nitrosp_01
NADH dehydrogenase (Ubiquinone) 24 kDa subunit id=4127936 bin=GWF2_Nitrospirae_44_13 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_165_c_18
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

12136..13908
DNA (1773bp) protein (591aa)
nuoF; NADH-quinone oxidoreductase subunit F (EC:1.6.5.3); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=CG_Nitrosp_01
nuoF; NADH-quinone oxidoreductase subunit F (EC:1.6.5.3)
NADH-quinone oxidoreductase, F subunit id=4127937 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_165_c_19
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

13988..15127
DNA (1140bp) protein (380aa)
nuoG; NADH-quinone oxidoreductase subunit G (EC:1.6.99.5) Tax=CG_Nitrosp_01
nuoG; NADH-quinone oxidoreductase subunit G (EC:1.6.99.5)
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding id=4127989 bin=GWF2_Nitrospirae_44_13 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_165_c_20
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

15176..16768
DNA (1593bp) protein (531aa)
NAD-dependent formate dehydrogenase catalytic subunit; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=CG_Nitrosp_01
Molybdopterin oxidoreductase id=4127990 bin=GWF2_Nitrospirae_44_13 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
NAD-dependent formate dehydrogenase catalytic subunit
cg_0.2_sub10_scaffold_165_c_21
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

16860..17315
DNA (456bp) protein (152aa)
cAMP-binding protein Tax=CG_Nitrosp_01
Putative transcriptional regulator, Crp/Fnr family id=4127991 bin=GWF2_Nitrospirae_44_13 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cAMP-binding protein
cg_0.2_sub10_scaffold_165_c_22
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

17421..19184
DNA (1764bp) protein (588aa)
formate--tetrahydrofolate ligase; K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] Tax=CG_Nitrosp_01
Formate--tetrahydrofolate ligase id=4127992 bin=GWF2_Nitrospirae_44_13 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
formate--tetrahydrofolate ligase
cg_0.2_sub10_scaffold_165_c_23
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

19389..19658
DNA (270bp) protein (90aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=4404376 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_165_c_24
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

19645..19920
DNA (276bp) protein (92aa)
hypothetical protein Tax=CG_Nitrosp_01
Genome sequencing data, contig C291 id=4404375 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Microcystis aeruginosa genus=Microcystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_165_c_25
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(20093..20575)
DNA (483bp) protein (161aa)
ppiB; peptidylprolyl isomerase (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] Tax=CG_Nitrosp_01
ppiB; peptidylprolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase id=4127993 bin=GWF2_Nitrospirae_44_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_165_c_26
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(20634..21926)
DNA (1293bp) protein (431aa)
AICARFT/IMPCHase protein; K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] Tax=CG_Nitrosp_01
AICARFT/IMPCHase bienzyme, formylation region id=4351800 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
AICARFT/IMPCHase protein
cg_0.2_sub10_scaffold_165_c_27
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

22020..22988
DNA (969bp) protein (323aa)
acetoin utilization protein Tax=CG_Nitrosp_01
Acetoin utilization protein id=4127997 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
acetoin utilization protein
cg_0.2_sub10_scaffold_165_c_28
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(22995..24239)
DNA (1245bp) protein (415aa)
beta-ketoacyl-acyl carrier protein synthase II; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=CG_Nitrosp_01
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=4127998 bin=GWF2_Nitrospirae_44_13 species=uncultured Nitrospirae bacterium MY3-5B genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
beta-ketoacyl-acyl carrier protein synthase II
cg_0.2_sub10_scaffold_165_c_29
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(24239..24469)
DNA (231bp) protein (77aa)
acpP; acyl carrier protein; K02078 acyl carrier protein Tax=CG_Nitrosp_01
Acyl carrier protein id=4127999 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
acpP; acyl carrier protein
Displaying items 1-30 of 48 in total

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