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cg_0.2_sub10_scaffold_260_c

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_260_c_1
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..212)
DNA (210bp) protein (70aa)
transposase
Transposase {ECO:0000313|EMBL:AJF05951.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterran
Transposase, IS4 family id=4526726 bin=GWC2_Pelobacter_58_13 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
cg_0.2_sub10_scaffold_260_c_2
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(399..1574)
DNA (1176bp) protein (392aa)
Major facilitator superfamily MFS_1 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCN1_9GAMM
major facilitator superfamily protein Tax=CG_Thiomicrospira_01
MFS transporter permease
cg_0.2_sub10_scaffold_260_c_3
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1623..2639)
DNA (1017bp) protein (339aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=CG_Thiomicrospira_01
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037D009E
glyceraldehyde-3-phosphate dehydrogenase
cg_0.2_sub10_scaffold_260_c_4
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2743..3093
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00036293AF
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator Tax=CG_Thiomicrospira_01
ArsR family transcriptional regulator
cg_0.2_sub10_scaffold_260_c_5
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3478..5370
DNA (1893bp) protein (631aa)
Phosphomethylpyrimidine synthase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=THIC_THICR rbh
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=CG_Thiomicrospira_01
thiamine biosynthesis protein ThiC
cg_0.2_sub10_scaffold_260_c_6
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5420..6499
DNA (1080bp) protein (360aa)
FAD dependent oxidoreductase; K03153 glycine oxidase [EC:1.4.3.19] Tax=CG_Thiomicrospira_01
Thiamine biosynthesis oxidoreductase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JD0_THICR
FAD dependent oxidoreductase
cg_0.2_sub10_scaffold_260_c_7
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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6496..6705
DNA (210bp) protein (70aa)
Thiamine biosynthesis sulfur transport protein ThiS n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JD1_THICR
thiamine biosynthesis protein ThiS; K03154 sulfur carrier protein Tax=CG_Thiomicrospira_01
thiamine biosynthesis protein ThiS
cg_0.2_sub10_scaffold_260_c_8
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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6706..7518
DNA (813bp) protein (271aa)
Thiazole synthase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=THIG_THICR rbh
thiG; thiazole synthase; K03149 thiamine biosynthesis ThiG Tax=CG_Thiomicrospira_01
thiG; thiazole synthase
cg_0.2_sub10_scaffold_260_c_9
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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7515..8183
DNA (669bp) protein (223aa)
thiamine-phosphate diphosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=CG_Thiomicrospira_01
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate diphosphorylase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JD3_THICR
cg_0.2_sub10_scaffold_260_c_10
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8176..9009
DNA (834bp) protein (278aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7); K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=CG_Thiomicrospira_01
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JD4_THICR
cg_0.2_sub10_scaffold_260_c_11
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9019..10431)
DNA (1413bp) protein (471aa)
Tax=CG_Thiomicrospira_01
cg_0.2_sub10_scaffold_260_c_12
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10602..11972)
DNA (1371bp) protein (457aa)
glutathione reductase; K00383 glutathione reductase (NADPH) [EC:1.8.1.7] Tax=CG_Thiomicrospira_01
NADPH-glutathione reductase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JD7_THICR
glutathione reductase
cg_0.2_sub10_scaffold_260_c_13
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12068..12796)
DNA (729bp) protein (243aa)
glutaredoxin-like region; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] Tax=CG_Thiomicrospira_01
Glutaredoxin-like region n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JD8_THICR
glutaredoxin-like region rbh
cg_0.2_sub10_scaffold_260_c_14
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12952..13401)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JD9_THICR
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_260_c_15
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13430..14641)
DNA (1212bp) protein (404aa)
HI0933-like protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JE0_THICR
hypothetical protein; K07007 Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_260_c_16
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14651..15397)
DNA (747bp) protein (249aa)
Molybdopterin binding domain n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JE1_THICR
molybdopterin binding domain-containing protein Tax=CG_Thiomicrospira_01
molybdopterin binding domain-containing protein
cg_0.2_sub10_scaffold_260_c_17
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15413..16222)
DNA (810bp) protein (270aa)
Cyclic-AMP phosphodiesterase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JE3_THICR
cyclic-AMP phosphodiesterase Tax=CG_Thiomicrospira_01
cyclic-AMP phosphodiesterase
cg_0.2_sub10_scaffold_260_c_18
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16334..17905
DNA (1572bp) protein (524aa)
Metal dependent phosphohydrolase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JE4_THICR
metal dependent phosphohydrolase Tax=CG_Thiomicrospira_01
metal dependent phosphohydrolase
cg_0.2_sub10_scaffold_260_c_19
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17930..18535)
DNA (606bp) protein (202aa)
YfaZ protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JE5_THICR
YfaZ Tax=CG_Thiomicrospira_01
YfaZ
cg_0.2_sub10_scaffold_260_c_20
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18537..18734)
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JE6_THICR
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_260_c_21
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18755..19759)
DNA (1005bp) protein (335aa)
Tax=CG_Thiomicrospira_01
cg_0.2_sub10_scaffold_260_c_22
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19899..21227)
DNA (1329bp) protein (443aa)
hypothetical protein; K15461 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] Tax=CG_Thiomicrospira_01
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=MNMC_THICR rbh
hypothetical protein
cg_0.2_sub10_scaffold_260_c_23
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21268..23484)
DNA (2217bp) protein (739aa)
uvrD; DNA-dependent helicase II; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=CG_Thiomicrospira_01
ATP-dependent DNA helicase UvrD n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JE9_THICR
uvrD; DNA-dependent helicase II
cg_0.2_sub10_scaffold_260_c_24
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23796..24122
DNA (327bp) protein (109aa)
Thioredoxin n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JF0_THICR
thioredoxin; K03671 thioredoxin 1 Tax=CG_Thiomicrospira_01
thioredoxin
cg_0.2_sub10_scaffold_260_c_25
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24257..25516
DNA (1260bp) protein (420aa)
Transcription termination factor Rho n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JF1_THICR
rho; transcription termination factor Rho; K03628 transcription termination factor Rho Tax=CG_Thiomicrospira_01
rho; transcription termination factor Rho
cg_0.2_sub10_scaffold_260_c_26
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


25711..25962
DNA (252bp) protein (84aa)
50S ribosomal protein L31 type B n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RL31B_THICR rbh
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=CG_Thiomicrospira_01
50S ribosomal protein L31
cg_0.2_sub10_scaffold_260_c_27
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26058..26882
DNA (825bp) protein (275aa)
Nuclease (SNase-like) n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JF3_THICR
nuclease (SNase-like) Tax=CG_Thiomicrospira_01
nuclease (SNase-like)
cg_0.2_sub10_scaffold_260_c_28
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27010..28077
DNA (1068bp) protein (356aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=CG_Thiomicrospira_01
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=DCUP_THICR rbh
cg_0.2_sub10_scaffold_260_c_29
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28138..28998)
DNA (861bp) protein (287aa)
molybdopterin binding domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=CG_Thiomicrospira_01
Molybdopterin molybdochelatase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JB6_THICR
molybdopterin binding domain-containing protein
Displaying 29 items

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