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cg_0.2_sub10_scaffold_22_c

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_22_c_16S_1
unknown

Not on your lists

329..1869
DNA (1541bp)
cg_0.2_sub10_scaffold_22_c_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1480..1770
DNA (291bp) protein (97aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=Q1R654_ECOUT
Uncharacterized protein {ECO:0000313|EMBL:ABE09160.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
hypothetical protein
cg_0.2_sub10_scaffold_22_c_trna_1
unknown

Not on your lists

1948..2021
DNA (74bp)
transferRNA
cg_0.2_sub10_scaffold_22_c_trna_2
unknown

Not on your lists

2154..2226
DNA (73bp)
transferRNA
cg_0.2_sub10_scaffold_22_c_2
unknown

Not on your lists

2520..2624
DNA (105bp) protein (35aa)

This feature has no annotations

cg_0.2_sub10_scaffold_22_c_3
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6324..7061
DNA (738bp) protein (246aa)
biotin--acetyl-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] Tax=CG_Thiomicrospira_01
Biotin--acetyl-CoA-carboxylase ligase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31E85_THICR
biotin--acetyl-CoA-carboxylase ligase
cg_0.2_sub10_scaffold_22_c_4
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7074..7820
DNA (747bp) protein (249aa)
transcriptional acitvator, Baf; K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=CG_Thiomicrospira_01
Type III pantothenate kinase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=COAX_THICR rbh
transcriptional acitvator, Baf
cg_0.2_sub10_scaffold_22_c_trna_3
unknown

Not on your lists

7868..7940
DNA (73bp)
transferRNA
cg_0.2_sub10_scaffold_22_c_5
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8060..8575
DNA (516bp) protein (172aa)
3-hydroxydecanoyl-ACP dehydratase (EC:4.2.1.60); K01716 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.60] Tax=CG_Thiomicrospira_01
3-hydroxydecanoyl-ACP dehydratase (EC:4.2.1.60)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=FABA_THICR rbh
cg_0.2_sub10_scaffold_22_c_6
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8576..9802
DNA (1227bp) protein (409aa)
Beta-ketoacyl synthase; K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] Tax=CG_Thiomicrospira_01
3-oxoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31E88_THICR
Beta-ketoacyl synthase
cg_0.2_sub10_scaffold_22_c_7
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9913..10578)
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31E89_THICR
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_22_c_8
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10607..11530)
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31E90_THICR
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_22_c_9
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11540..12622)
DNA (1083bp) protein (361aa)
Signal recognition particle receptor FtsY n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31E91_THICR
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor Tax=CG_Thiomicrospira_01
signal recognition particle-docking protein FtsY
cg_0.2_sub10_scaffold_22_c_10
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12740..14125
DNA (1386bp) protein (462aa)
peptidase M16-like; K01422 [EC:3.4.99.-] Tax=CG_Thiomicrospira_01
M16 peptidase family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31E92_THICR
peptidase M16-like
cg_0.2_sub10_scaffold_22_c_11
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14122..15459
DNA (1338bp) protein (446aa)
peptidase M16-like; K01422 [EC:3.4.99.-] Tax=CG_Thiomicrospira_01
M16 peptidase family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31E93_THICR
peptidase M16-like
cg_0.2_sub10_scaffold_22_c_12
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15541..17883
DNA (2343bp) protein (781aa)
Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31E96_THICR
diguanylate cyclase Tax=CG_Thiomicrospira_01
diguanylate cyclase
cg_0.2_sub10_scaffold_22_c_13
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17867..18457
DNA (591bp) protein (197aa)
hypothetical protein; K08316 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] Tax=CG_Thiomicrospira_01
Methyltransferase superfamily protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31EA1_THICR
hypothetical protein
cg_0.2_sub10_scaffold_22_c_14
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18478..18951
DNA (474bp) protein (158aa)
coenzyme A biosynthesis protein (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=CG_Thiomicrospira_01
coenzyme A biosynthesis protein (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=COAD_THICR rbh
cg_0.2_sub10_scaffold_22_c_15
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18972..19943)
DNA (972bp) protein (324aa)
HPP family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31EA4_THICR
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_22_c_16
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20027..22729)
DNA (2703bp) protein (901aa)
ATPase; K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=CG_Thiomicrospira_01
P-type ATPase (P-ATPase) superfamily cation transporter n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31EB0_THICR
ATPase
cg_0.2_sub10_scaffold_22_c_17
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22766..23281)
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31EB1_THICR
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_22_c_18
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23337..24167)
DNA (831bp) protein (277aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=CG_Thiomicrospira_01
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=FPG_THICR rbh
cg_0.2_sub10_scaffold_22_c_19
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24315..24527
DNA (213bp) protein (71aa)
Tax=CG_Thiomicrospira_01
cg_0.2_sub10_scaffold_22_c_20
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24772..27453
DNA (2682bp) protein (894aa)
Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31EB3_THICR
diguanylate cyclase Tax=CG_Thiomicrospira_01
diguanylate cyclase
cg_0.2_sub10_scaffold_22_c_21
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(27515..27667)
DNA (153bp) protein (51aa)
50S ribosomal protein L33 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RL33_THICR rbh
50S ribosomal protein L33
50S ribosomal protein L33 {ECO:0000255|HAMAP-Rule:MF_00294}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicr
cg_0.2_sub10_scaffold_22_c_22
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(27679..27915)
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RL28_THICR rbh
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=CG_Thiomicrospira_01
50S ribosomal protein L28
cg_0.2_sub10_scaffold_22_c_23
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28107..28817)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037AFD6E
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_22_c_24
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28817..29497)
DNA (681bp) protein (227aa)
UPF0758 protein Tcr_1917 n=2 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Y1917_THICR
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=CG_Thiomicrospira_01
DNA repair protein RadC
cg_0.2_sub10_scaffold_22_c_25
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29557..29943
DNA (387bp) protein (129aa)
4-hydroxybenzoyl-CoA thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=CG_Thiomicrospira_01
Thioesterase family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31EB7_THICR
4-hydroxybenzoyl-CoA thioesterase
cg_0.2_sub10_scaffold_22_c_26
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29940..31154
DNA (1215bp) protein (405aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5] Tax=CG_Thi
Phosphopantothenoylcysteine decarboxylase / Phosphopantothenate-cysteine ligase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31EB8_THICR
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
Displaying items 1-30 of 95 in total

View Taxonomy