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cg1_0.2_scaffold_419_c

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_419_c_1
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(717..1937)
-----------------
DNA (1221bp)
protein (407aa)
Integrase family protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y3L2_9SPHI rbh
cp4-like integrase Tax=CG_Alphaprot_01
cp4-like integrase
cg1_0.2_scaffold_419_c_trna_1
unknown

Not on your lists

comp(2086..2172)
-----------------
DNA (87bp)
transferRNA
cg1_0.2_scaffold_419_c_2
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2229..3500)
-----------------
DNA (1272bp)
protein (424aa)
Phage integrase family protein n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KRM0_MICAA rbh
phage integrase family protein Tax=CG_Alphaprot_01
phage integrase family protein rbh
cg1_0.2_scaffold_419_c_3
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3759..3857)
-----------------
DNA (99bp)
protein (33aa)
Tax=CG_Alphaprot_01
cg1_0.2_scaffold_419_c_4
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3962..4981
-----------------
DNA (1020bp)
protein (340aa)
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein Tax=CG_Alphaprot_01
ABC transporter
cg1_0.2_scaffold_419_c_5
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4982..5770
-----------------
DNA (789bp)
protein (263aa)
ABC transporter permease-like protein Tax=CG_Alphaprot_01
hypothetical protein
cg1_0.2_scaffold_419_c_6
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5760..6545
-----------------
DNA (786bp)
protein (262aa)
UniRef90_D1RA42 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RA42_9CHLA id=11655 bin=ACD17 species=Parachlamydia acanthamoebae genus=Parachlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=ACD17 organism_group=Chlamydiae organism_desc=CvE6 rbh
hypothetical protein; K01992 ABC-2 type transport system permease protein Tax=CG_Alphaprot_01
hypothetical protein
cg1_0.2_scaffold_419_c_7
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6546..7328
-----------------
DNA (783bp)
protein (261aa)
Putative membrane protein n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VHR6_9PROT rbh
hypothetical protein Tax=CG_Alphaprot_01
hypothetical protein
cg1_0.2_scaffold_419_c_8
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7336..8328
-----------------
DNA (993bp)
protein (331aa)
lytic murein transglycosylase family protein (EC:2.4.-.-); K08305 membrane-bound lytic murein transglycosylase B [EC:3.2.1.-] Tax=CG_Alphaprot_01
lytic murein transglycosylase family protein (EC:2.4.-.-)
Lytic murein transglycosylase family protein n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KRM2_MICAA rbh
cg1_0.2_scaffold_419_c_9
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8344..9327
-----------------
DNA (984bp)
protein (328aa)
Rare lipoprotein A family protein n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KRM3_MICAA rbh
rare lipoprotein A family protein; K03642 rare lipoprotein A Tax=CG_Alphaprot_01
rare lipoprotein A family protein
cg1_0.2_scaffold_419_c_10
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9362..10498
-----------------
DNA (1137bp)
protein (379aa)
D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] Tax=CG_Alphaprot_01
D-alanyl-D-alanine carboxypeptidase family protein n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KRM4_MICAA rbh
D-alanyl-D-alanine carboxypeptidase
cg1_0.2_scaffold_419_c_11
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10503..11168
-----------------
DNA (666bp)
protein (222aa)
tmk; thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=CG_Alphaprot_01
tmk; thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KRM5_MICAA rbh
cg1_0.2_scaffold_419_c_12
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11158..12279
-----------------
DNA (1122bp)
protein (374aa)
DNA polymerase III delta prime subunit (EC:2.7.7.7) Tax=CG_Alphaprot_01
DNA polymerase III delta prime subunit (EC:2.7.7.7)
DNA polymerase III delta prime subunit n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VHS1_9PROT rbh
cg1_0.2_scaffold_419_c_13
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12392..13948
-----------------
DNA (1557bp)
protein (519aa)
metG; methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=CG_Alphaprot_01
Methionine--tRNA ligase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7P6_AZOL4 rbh
metG; methionyl-tRNA synthetase
cg1_0.2_scaffold_419_c_14
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13951..14394
-----------------
DNA (444bp)
protein (148aa)
membrane protein n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C800A rbh
transport protein Tax=CG_Alphaprot_01
transport protein
cg1_0.2_scaffold_419_c_15
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14398..15198
-----------------
DNA (801bp)
protein (267aa)
TatD family hydrolase protein; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=CG_Alphaprot_01
Hydrolase, TatD family protein n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KRM8_MICAA rbh
TatD family hydrolase protein rbh
cg1_0.2_scaffold_419_c_16
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15279..15599
-----------------
DNA (321bp)
protein (107aa)
Putative uncharacterized protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VIU9_CAUST rbh
hypothetical protein Tax=CG_Alphaprot_01
hypothetical protein
cg1_0.2_scaffold_419_c_17
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15644..16459
-----------------
DNA (816bp)
protein (272aa)
Metal-dependent hydrolase of the beta-lactamase superfamily I, PhnP protein n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VFQ4_9PROT rbh
Metal-dependent hydrolase of the beta-lactamase superfamily I, PhnP protein Tax=CG_Alphaprot_01
Metal-dependent hydrolase of the beta-lactamase superfamily I, PhnP protein
cg1_0.2_scaffold_419_c_18
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16462..17496
-----------------
DNA (1035bp)
protein (345aa)
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-); K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=CG_Alphaprot_01
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=alpha proteobacterium JLT2015 RepID=M2SBE8_9PROT rbh
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
cg1_0.2_scaffold_419_c_19
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17548..18021
-----------------
DNA (474bp)
protein (158aa)
Tax=CG_Alphaprot_01
cg1_0.2_scaffold_419_c_20
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18167..19516)
-----------------
DNA (1350bp)
protein (450aa)
Putative methyl-accepting chemotaxis protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQS9_9SPHN rbh
putative bacterial chemotaxis sensory transducer Tax=CG_Alphaprot_01
Methyl-accepting chemotaxis protein
cg1_0.2_scaffold_419_c_21
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19652..19915
-----------------
DNA (264bp)
protein (88aa)
Transcriptional regulator, XRE family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V3Z3_SPHWW rbh
XRE family transcriptional regulator Tax=CG_Alphaprot_01
XRE family transcriptional regulator
cg1_0.2_scaffold_419_c_22
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20166..20660
-----------------
DNA (495bp)
protein (165aa)
nucleoside 2-deoxyribosyltransferase (EC:2.4.2.6) Tax=CG_Alphaprot_01
Nucleoside 2-deoxyribosyltransferase n=1 Tax=Pseudomonas aeruginosa BL04 RepID=U8M4P9_PSEAI rbh
hypothetical protein
cg1_0.2_scaffold_419_c_23
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20660..21460
-----------------
DNA (801bp)
protein (267aa)
mazG; nucleoside triphosphate pyrophosphohydrolase; K04765 ATP diphosphatase [EC:3.6.1.8] Tax=CG_Alphaprot_01
Uncharacterized protein n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9E1B7_9PROT rbh
mazG; nucleoside triphosphate pyrophosphohydrolase
cg1_0.2_scaffold_419_c_24
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21465..22349)
-----------------
DNA (885bp)
protein (295aa)
dTDP-6-deoxy-L-mannose dehydrogenase RmlD; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=CG_Alphaprot_01
dTDP-6-deoxy-L-mannose dehydrogenase RmlD
cg1_0.2_scaffold_419_c_25
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22367..22915)
-----------------
DNA (549bp)
protein (183aa)
PREDICTED: dTDP-4-dehydrorhamnose 3,5-epimerase-like n=1 Tax=Amphimedon queenslandica RepID=UPI00021A578B rbh
dTDP-4-dehydrorhamnose 3,5-epimerase-like Tax=CG_Alphaprot_01
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase
cg1_0.2_scaffold_419_c_26
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22961..23122)
-----------------
DNA (162bp)
protein (54aa)
Tax=CG_Alphaprot_01
cg1_0.2_scaffold_419_c_27
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23119..24537)
-----------------
DNA (1419bp)
protein (473aa)
Mur ligase middle domain-containing protein; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=CG_Alphaprot_01
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J2Q1_9SPHN rbh
Mur ligase middle domain-containing protein
cg1_0.2_scaffold_419_c_28
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24549..25190)
-----------------
DNA (642bp)
protein (214aa)
Tax=CG_Alphaprot_01
cg1_0.2_scaffold_419_c_29
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25307..27919)
-----------------
DNA (2613bp)
protein (871aa)
ATP-dependent chaperone ClpB n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KM45_MICAA rbh
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=CG_Alphaprot_01
ATP-dependent chaperone ClpB
Displaying items 1-30 of 50 in total

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