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cg1_0.2_scaffold_1709_c

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_1709_c_1
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

3..179
DNA (177bp) protein (59aa)
Tax=CG_Micra_03
cg1_0.2_scaffold_1709_c_2
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(169..870)
DNA (702bp) protein (234aa)
putative circadian clock protein, KaiC Tax=CG_Micra_03
hypothetical protein
hypothetical protein id=5240904 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
cg1_0.2_scaffold_1709_c_3
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(894..3551)
DNA (2658bp) protein (886aa)
Tax=CG_Micra_03
cg1_0.2_scaffold_1709_c_4
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(3548..8161)
DNA (4614bp) protein (1538aa)
Tax=CG_Micra_03
cg1_0.2_scaffold_1709_c_5
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

8635..9270
DNA (636bp) protein (212aa)
ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4] Tax=CG_Micra_03
Ribonuclease HII n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQL5_METIM rbh
ribonuclease HII
cg1_0.2_scaffold_1709_c_6
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

9340..10179
DNA (840bp) protein (280aa)
Tax=CG_Micra_03
cg1_0.2_scaffold_1709_c_7
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(10210..10890)
DNA (681bp) protein (227aa)
MscS family protein
MscS family protein Tax=CG_Micra_03
MscS family protein id=5240672 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
cg1_0.2_scaffold_1709_c_8
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

11018..11230
DNA (213bp) protein (71aa)
Tax=CG_Micra_03
cg1_0.2_scaffold_1709_c_9
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

11241..12212
DNA (972bp) protein (324aa)
Transcription initiation factor IIB n=1 Tax=uncultured euryarchaeote Alv-FOS5 RepID=Q3SBA6_9EURY rbh
transcription factor TFIIB cyclin-related protein; K03124 transcription initiation factor TFIIB Tax=CG_Micra_03
transcription initiation factor TFIIB
cg1_0.2_scaffold_1709_c_10
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(12178..13218)
DNA (1041bp) protein (347aa)
N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32); K00555 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] Tax=CG_Micra_03
tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HLD1_THES4 rbh
N(2),N(2)-dimethylguanosine tRNA methyltransferase
cg1_0.2_scaffold_1709_c_11
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists


comp(13215..13472)
DNA (258bp) protein (86aa)
50S ribosomal protein L35Ae n=1 Tax=sediment metagenome RepID=D9PEX7_9ZZZZ id=5103617 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome rbh
50S ribosomal protein L35; K02917 large subunit ribosomal protein L35Ae Tax=CG_Micra_03
50S ribosomal protein L35Ae
cg1_0.2_scaffold_1709_c_12
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

13529..13969
DNA (441bp) protein (147aa)
Tax=CG_Micra_03
cg1_0.2_scaffold_1709_c_13
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(13957..14562)
DNA (606bp) protein (202aa)
Tax=CG_Micra_03
cg1_0.2_scaffold_1709_c_14
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(14612..14755)
DNA (144bp) protein (48aa)
Tax=CG_Micra_03
cg1_0.2_scaffold_1709_c_15
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(14752..16308)
DNA (1557bp) protein (519aa)
Tax=CG_Micra_03
cg1_0.2_scaffold_1709_c_16
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

16423..17187
DNA (765bp) protein (255aa)
hypothetical protein Tax=CG_Micra_03
NEQ098 id=5800103 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
hypothetical protein
cg1_0.2_scaffold_1709_c_17
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists


comp(17190..17942)
DNA (753bp) protein (251aa)
30S ribosomal protein S3Ae n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXA4_METFV rbh
SSU ribosomal protein s3ae; K02984 small subunit ribosomal protein S3Ae Tax=CG_Micra_03
30S ribosomal protein S3ae
cg1_0.2_scaffold_1709_c_18
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists


comp(17944..18396)
DNA (453bp) protein (151aa)
30S ribosomal protein S15 n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RDM2_METVM rbh
rps15p; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=CG_Micra_03
rps15p; 30S ribosomal protein S15
cg1_0.2_scaffold_1709_c_19
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists


comp(18403..20748)
DNA (2346bp) protein (782aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=CG_Micra_03
Valine--tRNA ligase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1P3_FERPA rbh
valyl-tRNA synthetase
cg1_0.2_scaffold_1709_c_20
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(20756..20968)
DNA (213bp) protein (71aa)
Tax=CG_Micra_03
cg1_0.2_scaffold_1709_c_21
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists


comp(20977..21255)
DNA (279bp) protein (93aa)
30S ribosomal protein S28e n=1 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TDX8_THEC1 rbh
30S ribosomal protein S28e Tax=CG_Micra_03
30S ribosomal protein S28e
cg1_0.2_scaffold_1709_c_22
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists


comp(21262..21786)
DNA (525bp) protein (175aa)
Ribosomal protein L7Ae/L30e/S12e/Gadd45 n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI37_9EURY rbh
rpl7ae; 50S ribosomal protein L7Ae; K02936 large subunit ribosomal protein L7Ae Tax=CG_Micra_03
rpl7ae; 50S ribosomal protein L7Ae
cg1_0.2_scaffold_1709_c_23
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

21895..22956
DNA (1062bp) protein (354aa)
geranylgeranyl diphosphate synthase, type I (EC:2.5.1.1)
polyprenyl synthetase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] id=5241589 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
geranylgeranyl pyrophosphate synthase Tax=CG_Micra_03
Displaying 23 items

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