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cg1_0.2_scaffold_2002_c

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_2002_c_1
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(3..131)
DNA (129bp) protein (43aa)
Tax=CG_Micra_03
cg1_0.2_scaffold_2002_c_2
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(203..2038)
DNA (1836bp) protein (612aa)
DNA methylase n=3 Tax=Haemophilus parasuis RepID=N1V292_HAEPR rbh
DNA methylase Tax=CG_Micra_03
DNA methylase
cg1_0.2_scaffold_2002_c_3
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(2150..2278)
DNA (129bp) protein (43aa)
Tax=CG_Micra_03
cg1_0.2_scaffold_2002_c_4
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(2286..2528)
DNA (243bp) protein (81aa)
Tax=CG_Micra_03
cg1_0.2_scaffold_2002_c_5
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(2525..4174)
DNA (1650bp) protein (550aa)
ABC transporter related n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8A8H0_IGNH4 rbh
ATPase RIL; K06174 ATP-binding cassette, sub-family E, member 1 Tax=CG_Micra_03
ATPase RIL
cg1_0.2_scaffold_2002_c_6
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(4174..4674)
DNA (501bp) protein (167aa)
Tax=CG_Micra_03
cg1_0.2_scaffold_2002_c_7
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(4696..5655)
DNA (960bp) protein (320aa)
peptidase M24 n=1 Tax=Dehalobacter sp. E1 RepID=UPI000306D7F2 rbh
Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP-specific) Tax=CG_Micra_03
peptidase M24
cg1_0.2_scaffold_2002_c_8
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(5652..6725)
DNA (1074bp) protein (358aa)
Cellulase (EC:3.2.1.4); K01179 endoglucanase [EC:3.2.1.4] Tax=CG_Micra_03
Cellulase (EC:3.2.1.4)
Cellulase n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S7K9_METSF rbh
cg1_0.2_scaffold_2002_c_9
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

6780..7067
DNA (288bp) protein (96aa)
nucleic acid binding OB-fold tRNA/helicase-type Tax=CG_Micra_03
Nucleic acid binding OB-fold tRNA/helicase-type id=5799834 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
OB-fold nucleic acid binding protein
cg1_0.2_scaffold_2002_c_trna_1
unknown

Not on your lists

7105..7177
DNA (73bp)
transferRNA
cg1_0.2_scaffold_2002_c_10
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

7479..7874
DNA (396bp) protein (132aa)
Tax=CG_Micra_03
cg1_0.2_scaffold_2002_c_11
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(7909..9630)
DNA (1722bp) protein (574aa)
sodium/hydrogen exchanger Tax=CG_Micra_03
Transporter, CPA2 family id=5799540 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
sodium/hydrogen exchanger
cg1_0.2_scaffold_2002_c_12
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(9703..10581)
DNA (879bp) protein (293aa)
pyruvate ferredoxin oxidoreductase subunit beta (EC:1.2.7.1); K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] Tax=CG_Micra_03
pyruvate ferredoxin oxidoreductase subunit beta (EC:1.2.7.1)
Pyruvate ferredoxin oxidoreductase, beta subunit n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXN4_METFV rbh
cg1_0.2_scaffold_2002_c_13
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(10586..11683)
DNA (1098bp) protein (366aa)
pyruvate ferredoxin oxidoreductase, alpha subunit (EC:1.2.7.1); K00169 pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1] Tax=CG_Micra_03
pyruvate ferredoxin oxidoreductase, alpha subunit (EC:1.2.7.1)
Pyruvate ferredoxin oxidoreductase, alpha subunit n=1 Tax=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) RepID=A2STC7_METLZ rbh
cg1_0.2_scaffold_2002_c_14
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(11691..11930)
DNA (240bp) protein (80aa)
vorD; 2-ketoisovalerate ferredoxin oxidoreductase subunit delta (EC:1.2.7.7); K00188 2-oxoisovalerate ferredoxin oxidoreductase, delta subunit [EC:1.2.7.7] Tax=CG_Micra_03
vorD; 2-ketoisovalerate ferredoxin oxidoreductase subunit delta (EC:1.2.7.7)
cg1_0.2_scaffold_2002_c_15
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists


11980..13365
DNA (1386bp) protein (462aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=CG_Micra_03
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Pyrococcus furiosus RepID=SYFA_PYRFU rbh
cg1_0.2_scaffold_2002_c_16
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists


13374..14972
DNA (1599bp) protein (533aa)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=CG_Micra_03
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RER2_ARCPA rbh
cg1_0.2_scaffold_2002_c_17
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

14972..15415
DNA (444bp) protein (148aa)
small multi-drug exporter Tax=CG_Micra_03
putative small multi-drug exporter id=120478 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1 rbh
small multi-drug exporter
cg1_0.2_scaffold_2002_c_18
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(15402..15839)
DNA (438bp) protein (146aa)
Tax=CG_Micra_03
cg1_0.2_scaffold_2002_c_19
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(15867..16613)
DNA (747bp) protein (249aa)
Tax=CG_Micra_03
cg1_0.2_scaffold_2002_c_20
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(16615..16842)
DNA (228bp) protein (76aa)
50S ribosomal protein L37Ae n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=RL37A_THESM rbh
rpl37ae; 50S ribosomal protein L37; K02921 large subunit ribosomal protein L37Ae Tax=CG_Micra_03
rpl37ae; 50S ribosomal protein L37
cg1_0.2_scaffold_2002_c_21
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(16852..17622)
DNA (771bp) protein (257aa)
Exosome complex component Rrp42 n=1 Tax=Thermococcus sp. AM4 RepID=B7R2M6_9EURY rbh
exosome complex exonuclease RRP43; K12589 exosome complex component RRP42 Tax=CG_Micra_03
exosome complex exonuclease RRP43
cg1_0.2_scaffold_2002_c_22
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(17619..18371)
DNA (753bp) protein (251aa)
3' exoribonuclease n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI01_9EURY rbh
exosome complex exonuclease Rrp41 Tax=CG_Micra_03
exosome complex exonuclease Rrp41
cg1_0.2_scaffold_2002_c_23
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(18379..18972)
DNA (594bp) protein (198aa)
RNA-binding protein n=1 Tax=Thermococcus zilligii RepID=UPI00029A3E28 rbh
RNA-binding protein Tax=CG_Micra_03
RNA-binding protein
cg1_0.2_scaffold_2002_c_24
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists


comp(18986..19675)
DNA (690bp) protein (230aa)
Ribosome maturation protein SBDS n=1 Tax=mine drainage metagenome RepID=T1B604_9ZZZZ rbh
ribosome maturation protein SBDS-like protein; K14574 ribosome maturation protein SDO1 Tax=CG_Micra_03
ribosome maturation protein SBDS-like protein
cg1_0.2_scaffold_2002_c_25
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(19680..20378)
DNA (699bp) protein (233aa)
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=CG_Micra_03
psmA; proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=PSA_PYRAB rbh
cg1_0.2_scaffold_2002_c_26
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(20473..20763)
DNA (291bp) protein (97aa)
Tax=CG_Micra_03
cg1_0.2_scaffold_2002_c_27
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(20768..21247)
DNA (480bp) protein (160aa)
Tax=CG_Micra_03
Displaying 28 items

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