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cg1_0.2_scaffold_3695_c

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_3695_c_1
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(1..1092)
DNA (1092bp) protein (364aa)
type 2 DNA topoisomerase 6 subunit B; K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] Tax=CG_Micra_04
DNA topoisomerase VI, B subunit (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSI6_METIM rbh
cg1_0.2_scaffold_3695_c_2
CG_Micra_04, Micraarchaeota, Archaea

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comp(1092..1592)
DNA (501bp) protein (167aa)
KH domain protein n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P8C2_METFA rbh
putative RNA-processing protein; K06961 ribosomal RNA assembly protein Tax=CG_Micra_04
putative RNA-processing protein
cg1_0.2_scaffold_3695_c_3
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

1748..1858
DNA (111bp) protein (37aa)
Tax=CG_Micra_04
cg1_0.2_scaffold_3695_c_4
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

1862..2209
DNA (348bp) protein (116aa)
Tax=CG_Micra_04
cg1_0.2_scaffold_3695_c_5
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists


comp(2222..2614)
DNA (393bp) protein (131aa)
translation initiation factor IF-5A; K03263 translation initiation factor 5A Tax=CG_Micra_04
translation initiation factor 5A
translation initiation factor eIF-5A; K03263 translation initiation factor 5A id=5241822 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
cg1_0.2_scaffold_3695_c_6
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

2672..3415
DNA (744bp) protein (248aa)
TatD; Mg-dependent DNase; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=CG_Micra_04
Mg-dependent DNase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TXW3_METKA rbh
TatD; Mg-dependent DNase
cg1_0.2_scaffold_3695_c_7
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

3403..3867
DNA (465bp) protein (155aa)
Uncharacterized conserved protein n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TXB1_METKA rbh
hypothetical protein Tax=CG_Micra_04
hypothetical protein
cg1_0.2_scaffold_3695_c_8
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

3868..4845
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Entamoeba histolytica RepID=C4M8W1_ENTHI rbh
298.t00006; hypothetical protein Tax=CG_Micra_04
OmpA/MotB domain-containing protein
cg1_0.2_scaffold_3695_c_9
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

4842..5630
DNA (789bp) protein (263aa)
Site-determining protein n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GLK0_METTF rbh
iron-sulfur cluster carrier protein; K03609 septum site-determining protein MinD Tax=CG_Micra_04
iron-sulfur cluster carrier protein
cg1_0.2_scaffold_3695_c_10
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

5627..5863
DNA (237bp) protein (79aa)
Sm-family ribonucleoprotein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHC2_9EURY rbh
small nuclear ribonucleoprotein; K04796 small nuclear ribonucleoprotein Tax=CG_Micra_04
small nuclear ribonucleoprotein
cg1_0.2_scaffold_3695_c_trna_1
unknown

Not on your lists

5906..5978
DNA (73bp)
transferRNA
cg1_0.2_scaffold_3695_c_11
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

5983..6609
DNA (627bp) protein (209aa)
Tax=CG_Micra_04
cg1_0.2_scaffold_3695_c_12
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

6646..7716
DNA (1071bp) protein (357aa)
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=CG_Micra_04
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00035FB78D rbh
cg1_0.2_scaffold_3695_c_13
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

7784..8530
DNA (747bp) protein (249aa)
Tax=CG_Micra_04
cg1_0.2_scaffold_3695_c_14
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(8657..9280)
DNA (624bp) protein (208aa)
Tax=CG_Micra_04
cg1_0.2_scaffold_3695_c_15
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

9333..9650
DNA (318bp) protein (106aa)
Tax=CG_Micra_04
cg1_0.2_scaffold_3695_c_16
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

9655..10209
DNA (555bp) protein (185aa)
ynaD; ynad Tax=CG_Micra_04
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase id=73784 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER rbh
cg1_0.2_scaffold_3695_c_17
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

10219..11073
DNA (855bp) protein (285aa)
hypothetical protein Tax=CG_Micra_04
cg1_0.2_scaffold_3695_c_18
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

11158..11520
DNA (363bp) protein (121aa)
hypothetical protein
Uncharacterized protein Tax=CG_Micra_04
cg1_0.2_scaffold_3695_c_19
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

11562..12638
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037A868F rbh
hypothetical protein Tax=CG_Micra_04
hypothetical protein
cg1_0.2_scaffold_3695_c_20
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(12645..13100)
DNA (456bp) protein (152aa)
nusA; transcription elongation factor NusA-like protein
nusA; transcription elongation factor NusA-like protein Tax=CG_Micra_04
nusA; transcription elongation factor NusA-like protein id=5240665 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
cg1_0.2_scaffold_3695_c_21
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(13209..13553)
DNA (345bp) protein (115aa)
Alba, DNA/RNA-binding protein, archaeal (Fragment) n=1 Tax=mine drainage metagenome RepID=T1ALV4_9ZZZZ rbh
DNA-binding protein Alba; K03622 archaea-specific DNA-binding protein Tax=CG_Micra_04
DNA-binding protein Alba
cg1_0.2_scaffold_3695_c_22
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(13576..13761)
DNA (186bp) protein (62aa)
4 Fe-4S ferredoxin n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LUU5_THEPS rbh
4 Fe-4S ferredoxin
Tax=CG_Micra_04
cg1_0.2_scaffold_3695_c_23
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(13823..14284)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RI04_ARCPA rbh
hypothetical protein; K09150 hypothetical protein Tax=CG_Micra_04
hypothetical protein
cg1_0.2_scaffold_3695_c_24
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(14389..15225)
DNA (837bp) protein (279aa)
Tax=CG_Micra_04
cg1_0.2_scaffold_3695_c_25
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(15271..15834)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B3M9_9ARCH rbh
hypothetical protein Tax=CG_Micra_04
putative alkaline phosphatase
cg1_0.2_scaffold_3695_c_26
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(15901..16089)
DNA (189bp) protein (63aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=3 Tax=Burkholderiales RepID=D9Y2R8_9BURK rbh
Tax=BJP_IG2158_Thermoplasmatales_53_16
Displaying 27 items

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