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cg1_0.2_scaffold_3680_c

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_3680_c_1
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..263
DNA (261bp) protein (87aa)
hypothetical protein; K07220 hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
phosphate transport regulator id=12553160 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
cg1_0.2_scaffold_3680_c_2
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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281..1291
DNA (1011bp) protein (337aa)
Phosphate transporter n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T289_ACIDE rbh
phosphate transporter Tax=CG_Rhodof_04
phosphate transporter
cg1_0.2_scaffold_3680_c_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1338..1949)
DNA (612bp) protein (204aa)
GCN5-like protein N-acetyltransferase; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183] Tax=CG_Rhodof_04
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002DED280 rbh
GCN5-like protein N-acetyltransferase
cg1_0.2_scaffold_3680_c_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2006..2257
DNA (252bp) protein (84aa)
30S ribosomal protein S16 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RS16_RHOFD rbh
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=CG_Rhodof_04
30S ribosomal protein S16
cg1_0.2_scaffold_3680_c_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2267..2830
DNA (564bp) protein (188aa)
Ribosome maturation factor RimM n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y1P5_RAMTT rbh
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM Tax=CG_Rhodof_04
rimM; 16S rRNA-processing protein RimM
cg1_0.2_scaffold_3680_c_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2841..3584
DNA (744bp) protein (248aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=CG_Rhodof_04
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=TRMD_RHOFD rbh
cg1_0.2_scaffold_3680_c_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3682..4056
DNA (375bp) protein (125aa)
50S ribosomal protein L19 n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q945_ACIAP rbh
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=CG_Rhodof_04
50S ribosomal protein L19
cg1_0.2_scaffold_3680_c_8
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4156..4836
DNA (681bp) protein (227aa)
NUDIX hydrolase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T282_ACIDE rbh
NUDIX hydrolase Tax=CG_Rhodof_04
NUDIX hydrolase
cg1_0.2_scaffold_3680_c_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4875..5846
DNA (972bp) protein (324aa)
hypothetical protein; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10] Tax=CG_Rhodof_04
Cobalamin biosynthesis protein CobD n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YL3_RHOFD rbh
hypothetical protein
cg1_0.2_scaffold_3680_c_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5903..6850)
DNA (948bp) protein (316aa)
GTPase EngC; K06949 ribosome biogenesis GTPase [EC:3.6.1.-] Tax=CG_Rhodof_04
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YL1_RHOFD rbh
GTPase EngC
cg1_0.2_scaffold_3680_c_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6850..8142)
DNA (1293bp) protein (431aa)
membrane protein; K06013 STE24 endopeptidase [EC:3.4.24.84] Tax=CG_Rhodof_04
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DWS3_9BACT rbh
membrane protein
cg1_0.2_scaffold_3680_c_12
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8180..8794
DNA (615bp) protein (205aa)
oligoribonuclease; K13288 oligoribonuclease [EC:3.1.-.-] Tax=CG_Rhodof_04
Oligoribonuclease n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VMA6_POLNA rbh
oligoribonuclease
cg1_0.2_scaffold_3680_c_13
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9362..11296
DNA (1935bp) protein (645aa)
DEAD/DEAH box helicase-like n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YK7_RHOFD rbh
DEAD/DEAH box helicase-like protein Tax=CG_Rhodof_04
DEAD/DEAH box helicase-like protein
cg1_0.2_scaffold_3680_c_14
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11540..12016
DNA (477bp) protein (159aa)
4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UJ1_RHOFD rbh
4Fe-4S ferredoxin Tax=CG_Rhodof_04
4Fe-4S ferredoxin
cg1_0.2_scaffold_3680_c_15
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12029..13882
DNA (1854bp) protein (618aa)
aldehyde ferredoxin oxidoreductase (EC:1.2.7.5); K03738 aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] Tax=CG_Rhodof_04
aldehyde ferredoxin oxidoreductase (EC:1.2.7.5)
Phenylacetaldehyde:ferredoxin oxidoreductase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UJ2_RHOFD rbh
cg1_0.2_scaffold_3680_c_16
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14088..14777
DNA (690bp) protein (230aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UJ3_RHOFD rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=CG_Rhodof_04
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Displaying 16 items

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