ggKbase home page

cg1_0.2_scaffold_473_c

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_473_c_1
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16..1230
DNA (1215bp) protein (405aa)
Outer membrane efflux protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221Y6_RHOFD rbh
outer membrane efflux protein Tax=CG_Rhodof_04
outer membrane efflux protein
cg1_0.2_scaffold_473_c_2
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1227..1448
DNA (222bp) protein (74aa)
Cation efflux transmembrane protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K9R5_AZOSB
cusB; cation efflux transmembrane protein; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB Tax=CG_Rhodof_04
cusB; cation efflux transmembrane protein
cg1_0.2_scaffold_473_c_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1611..3236
DNA (1626bp) protein (542aa)
Secretion protein HlyD n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221Y7_RHOFD rbh
secretion protein HlyD; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB Tax=CG_Rhodof_04
secretion protein HlyD
cg1_0.2_scaffold_473_c_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3462..6596
DNA (3135bp) protein (1045aa)
Heavy metal efflux pump CzcA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221Y8_RHOFD rbh
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA Tax=CG_Rhodof_04
heavy metal efflux pump CzcA
cg1_0.2_scaffold_473_c_5
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6664..7098)
DNA (435bp) protein (145aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JTG6_9GAMM rbh
PIN domain-containing protein family protein
cg1_0.2_scaffold_473_c_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7095..7325)
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Candidatus Regiella insecticola R5.15 RepID=G2GXH8_9ENTR rbh
putative transcriptional regulator Tax=CG_Rhodof_04
putative transcriptional regulator
cg1_0.2_scaffold_473_c_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7594..7941)
DNA (348bp) protein (116aa)
Transcriptional regulator, XRE family n=2 Tax=mine drainage metagenome RepID=E6QH58_9ZZZZ rbh
hypothetical protein Tax=CG_Rhodof_04
Transcriptional regulator, XRE family
cg1_0.2_scaffold_473_c_8
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8042..8452)
DNA (411bp) protein (137aa)
PilT domain-containing protein n=1 Tax=mine drainage metagenome RepID=T1CAD4_9ZZZZ
PilT protein domain-containing protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_473_c_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8452..8706)
DNA (255bp) protein (85aa)
Conserved domain protein n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YGW5_TREPZ rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_473_c_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9076..9579
DNA (504bp) protein (168aa)
Heavy metal efflux pump CzcA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221Y8_RHOFD
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA Tax=CG_Rhodof_04
heavy metal efflux pump CzcA
cg1_0.2_scaffold_473_c_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9606..9938)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0003140DB9 rbh
lambda repressor-like, dna-binding; protein; K07726 putative transcriptional regulator Tax=CG_Rhodof_04
lambda repressor-like, dna-binding; protein
cg1_0.2_scaffold_473_c_12
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9922..10293)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IHM5_RHIML rbh
hypothetical protein Tax=CG_Rhodof_04
PF06296 family protein
cg1_0.2_scaffold_473_c_13
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10373..11377)
DNA (1005bp) protein (335aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036811F3 rbh
hypothetical protein; K03298 drug/metabolite transporter, DME family Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_473_c_14
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11347..12015)
DNA (669bp) protein (223aa)
Cupin 2 conserved barrel domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUM1_ALIDB rbh
cupin 2 conserved barrel domain protein Tax=CG_Rhodof_04
cupin 2 barrel domain-containing protein
cg1_0.2_scaffold_473_c_15
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12091..12360)
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CUM8_SIDLE rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_473_c_16
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12815..13309)
DNA (495bp) protein (165aa)
Transcriptional regulator, XRE family n=2 Tax=mine drainage metagenome RepID=E6QH58_9ZZZZ
hypothetical protein Tax=CG_Rhodof_04
Transcriptional regulator, XRE family
cg1_0.2_scaffold_473_c_17
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13368..14153
DNA (786bp) protein (262aa)
Heavy metal efflux pump CzcA n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DS9_DECAR
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA Tax=CG_Rhodof_04
heavy metal efflux pump CzcA
cg1_0.2_scaffold_473_c_18
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14307..14504)
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CUS6_SIDLE rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_473_c_19
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14599..14745)
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CUS5_SIDLE rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_473_c_20
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15136..15738
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPR1_ACCPU rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_473_c_21
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15735..17210
DNA (1476bp) protein (492aa)
AMP-dependent synthetase and ligase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPR2_ACCPU rbh
AMP-dependent synthetase and ligase Tax=CG_Rhodof_04
AMP-dependent synthetase and ligase
cg1_0.2_scaffold_473_c_22
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17207..17872
DNA (666bp) protein (222aa)
Carbamoylphosphate synthase large subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPR3_ACCPU rbh
carbamoylphosphate synthase large subunit Tax=CG_Rhodof_04
carbamoylphosphate synthase large subunit
cg1_0.2_scaffold_473_c_23
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17863..18666
DNA (804bp) protein (268aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPR4_ACCPU rbh
short-chain dehydrogenase/reductase SDR Tax=CG_Rhodof_04
short-chain dehydrogenase/reductase SDR
cg1_0.2_scaffold_473_c_24
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18663..19301
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPR5_ACCPU rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_473_c_25
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19505..20059)
DNA (555bp) protein (185aa)
adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] Tax=CG_Rhodof_04
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTX2_9BURK rbh
cg1_0.2_scaffold_473_c_26
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20098..22083)
DNA (1986bp) protein (662aa)
Sodium/hydrogen exchanger n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21QM8_RHOFD rbh
sodium/hydrogen exchanger; K03455 monovalent cation:H+ antiporter-2, CPA2 family Tax=CG_Rhodof_04
sodium/hydrogen exchanger
cg1_0.2_scaffold_473_c_27
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22125..23126
DNA (1002bp) protein (334aa)
KpsF/GutQ family protein (EC:5.3.1.13); K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13] Tax=CG_Rhodof_04
KpsF/GutQ family protein (EC:5.3.1.13)
KpsF/GutQ family protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21QM9_RHOFD rbh
cg1_0.2_scaffold_473_c_28
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23126..23671
DNA (546bp) protein (182aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Acidovorax radicis RepID=UPI0002377135 rbh
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Tax=CG_Rhodof_04
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
cg1_0.2_scaffold_473_c_29
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23668..24285
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037C92C2 rbh
hypothetical protein; K11719 lipopolysaccharide export system protein LptC Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_473_c_30
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24287..25078
DNA (792bp) protein (264aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDA5_ACISJ rbh
short chain dehydrogenase Tax=CG_Rhodof_04
short chain dehydrogenase
Displaying items 1-30 of 45 in total

View Taxonomy