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cg1_0.2_scaffold_828_c

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_828_c_1
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114..665
DNA (552bp) protein (184aa)
Putative excisionase, DNA-binding n=1 Tax=Ralstonia syzygii R24 RepID=G3AAI5_9RALS rbh
Putative excisionase, DNA-binding Tax=CG_Rhodof_04
cg1_0.2_scaffold_828_c_2
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

655..1338
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum CFBP2957 RepID=D8P5F6_RALSL rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_828_c_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1592..2992
DNA (1401bp) protein (467aa)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SH5_RHOFD rbh
periplasmic sensor signal transduction histidine kinase Tax=CG_Rhodof_04
periplasmic sensor signal transduction histidine kinase
cg1_0.2_scaffold_828_c_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2967..3656
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SH6_RHOFD rbh
response regulator receiver domain-containing protein Tax=CG_Rhodof_04
response regulator receiver domain-containing protein
cg1_0.2_scaffold_828_c_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3673..5643
DNA (1971bp) protein (657aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SH7_RHOFD rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=CG_Rhodof_04
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
cg1_0.2_scaffold_828_c_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5703..5927)
DNA (225bp) protein (75aa)
Tax=CG_Rhodof_04
cg1_0.2_scaffold_828_c_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6020..6445)
DNA (426bp) protein (142aa)
hypothetical protein; K07112 Tax=CG_Rhodof_04
hypothetical protein; K07112 id=12550185 bin=BDI species=unknown genus=Rhodoferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein
cg1_0.2_scaffold_828_c_8
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6442..6915)
DNA (474bp) protein (158aa)
hypothetical protein; K07112 Tax=CG_Rhodof_04
hypothetical protein; K07112 id=12550184 bin=BDI species=unknown genus=Rhodoferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein
cg1_0.2_scaffold_828_c_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6963..9560)
DNA (2598bp) protein (866aa)
PII uridylyl-transferase (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] Tax=CG_Rhodof_04
PII uridylyl-transferase (EC:2.7.7.59)
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VR4_RHOFD rbh
cg1_0.2_scaffold_828_c_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9581..10390)
DNA (810bp) protein (270aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=CG_Rhodof_04
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VR5_RHOFD rbh
cg1_0.2_scaffold_828_c_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10481..11137)
DNA (657bp) protein (219aa)
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] Tax=CG_Rhodof_04
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=KAD_RHOFD rbh
cg1_0.2_scaffold_828_c_12
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11251..12012)
DNA (762bp) protein (254aa)
3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=CG_Rhodof_04
3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=uncultured bacterium RepID=K2CXH9_9BACT rbh
cg1_0.2_scaffold_828_c_13
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12047..12250)
DNA (204bp) protein (68aa)
UPF0434 protein PMI15_03730 n=1 Tax=Polaromonas sp. CF318 RepID=J2KKC0_9BURK rbh
hypothetical protein; K09791 hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_828_c_14
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12247..13236)
DNA (990bp) protein (330aa)
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=CG_Rhodof_04
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=LPXK_RHOFD rbh
cg1_0.2_scaffold_828_c_15
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13333..13761)
DNA (429bp) protein (143aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TP0_RHOFD rbh
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD Tax=CG_Rhodof_04
biopolymer transport protein ExbD/TolR
cg1_0.2_scaffold_828_c_16
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13773..14468)
DNA (696bp) protein (232aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TP1_RHOFD rbh
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB Tax=CG_Rhodof_04
MotA/TolQ/ExbB proton channel
cg1_0.2_scaffold_828_c_17
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14715..16085
DNA (1371bp) protein (457aa)
exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] Tax=CG_Rhodof_04
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TP2_RHOFD rbh
cg1_0.2_scaffold_828_c_18
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16132..16713
DNA (582bp) protein (194aa)
Superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=CG_Rhodof_04
Superoxide dismutase (EC:1.15.1.1)
cg1_0.2_scaffold_828_c_19
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16829..17281)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7J4_ACIDE rbh
hypothetical protein; K09005 hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_828_c_20
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17354..17584)
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KT17_9BURK rbh
signal peptide Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_828_c_21
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17794..19047
DNA (1254bp) protein (418aa)
isocitrate dehydrogenase (EC:1.1.1.41); K00031 isocitrate dehydrogenase [EC:1.1.1.42] Tax=CG_Rhodof_04
isocitrate dehydrogenase (EC:1.1.1.41)
Isocitrate dehydrogenase [NADP] n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UT0_RHOFD rbh
cg1_0.2_scaffold_828_c_22
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19160..20593)
DNA (1434bp) protein (478aa)
FAD linked oxidase-like n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21U53_RHOFD rbh
FAD linked oxidase-like protein Tax=CG_Rhodof_04
FAD linked oxidase-like protein
cg1_0.2_scaffold_828_c_23
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20574..21002)
DNA (429bp) protein (143aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003627854 rbh
membrane protein-like protein Tax=CG_Rhodof_04
membrane protein-like protein
cg1_0.2_scaffold_828_c_24
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21024..22262
DNA (1239bp) protein (413aa)
UPF0761 membrane protein Rfer_2991 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Y2991_RHOFD rbh
ribonuclease BN; K07058 membrane protein Tax=CG_Rhodof_04
ribonuclease BN
cg1_0.2_scaffold_828_c_25
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22371..22469
DNA (99bp) protein (33aa)
Tax=CG_Rhodof_04
cg1_0.2_scaffold_828_c_26
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22417..24513
DNA (2097bp) protein (699aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221U3_RHOFD rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=CG_Rhodof_04
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
cg1_0.2_scaffold_828_c_27
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24486..25193
DNA (708bp) protein (236aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221U3_RHOFD
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=CG_Rhodof_04
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
cg1_0.2_scaffold_828_c_28
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25233..26051)
DNA (819bp) protein (273aa)
Alpha/beta hydrolase fold protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQY3_POLNA rbh
alpha/beta hydrolase fold protein Tax=CG_Rhodof_04
alpha/beta hydrolase fold protein
cg1_0.2_scaffold_828_c_29
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26135..27445)
DNA (1311bp) protein (437aa)
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49) Tax=CG_Rhodof_04
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I2S2_9BURK rbh
cg1_0.2_scaffold_828_c_30
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27599..28063
DNA (465bp) protein (155aa)
XRE family transcriptional regulator n=1 Tax=Curvibacter lanceolatus RepID=UPI0003766B95 rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
Displaying items 1-30 of 35 in total

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