ggKbase home page

cg1_0.2_scaffold_1246_c

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_1246_c_1
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..165)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6Y4A5_9RHOO rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1246_c_2
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(341..1069)
DNA (729bp) protein (243aa)
Lipoprotein, putative n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5ECW8_GEOBB rbh
lipoprotein Tax=CG_Rhodof_04
lipoprotein
cg1_0.2_scaffold_1246_c_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1224..1736)
DNA (513bp) protein (171aa)
PHP domain-containing protein Tax=CG_Rhodof_04
PHP domain-containing protein
cg1_0.2_scaffold_1246_c_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1896..2492
DNA (597bp) protein (199aa)
Integrase/recombinase (E2 protein) n=1 Tax=mine drainage metagenome RepID=E6PMN3_9ZZZZ rbh
truncated integrase/recombinase Tax=CG_Rhodof_04
truncated integrase/recombinase
cg1_0.2_scaffold_1246_c_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2944..4137)
DNA (1194bp) protein (398aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=CG_Rhodof_04
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=MNMA_RHOFD rbh
cg1_0.2_scaffold_1246_c_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4328..4828)
DNA (501bp) protein (167aa)
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1246_c_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4979..6601
DNA (1623bp) protein (541aa)
pntA; NAD(P) transhydrogenase subunit alpha (EC:1.6.1.2); K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2] Tax=CG_Rhodof_04
pntA; NAD(P) transhydrogenase subunit alpha (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RZ9_RHOFD rbh
cg1_0.2_scaffold_1246_c_8
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6615..8033
DNA (1419bp) protein (473aa)
NAD(P) transhydrogenase subunit beta; K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2] Tax=CG_Rhodof_04
NAD(P) transhydrogenase subunit beta n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S00_RHOFD rbh
NAD(P) transhydrogenase subunit beta
cg1_0.2_scaffold_1246_c_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8202..9875
DNA (1674bp) protein (558aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=CG_Rhodof_04
AMP-dependent synthetase and ligase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S01_RHOFD rbh
AMP-dependent synthetase and ligase
cg1_0.2_scaffold_1246_c_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9886..10665)
DNA (780bp) protein (260aa)
mtap; S-methyl-5'-thioadenosine phosphorylase (EC:2.4.2.28) Tax=CG_Rhodof_04
mtap; S-methyl-5'-thioadenosine phosphorylase (EC:2.4.2.28)
Purine nucleoside phosphorylase n=1 Tax=candidate division TG3 bacterium ACht1 RepID=U7D737_9BACT rbh
cg1_0.2_scaffold_1246_c_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10637..11278)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y5S6_BILWA rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1246_c_12
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11275..12387)
DNA (1113bp) protein (371aa)
mtnA; S-methyl-5-thioribose-1-phosphate isomerase (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=CG_Rhodof_04
mtnA; S-methyl-5-thioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YNX4_TREPZ rbh
cg1_0.2_scaffold_1246_c_13
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12384..13370)
DNA (987bp) protein (329aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S05_RHOFD rbh
magnesium and cobalt transport protein CorA; K03284 magnesium transporter Tax=CG_Rhodof_04
magnesium and cobalt transport protein CorA
cg1_0.2_scaffold_1246_c_14
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13693..14022
DNA (330bp) protein (110aa)
Sigma-54 modulation type protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NA25_9BURK rbh
sigma-54 modulation type protein Tax=CG_Rhodof_04
sigma-54 modulation type protein
cg1_0.2_scaffold_1246_c_15
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14107..14574
DNA (468bp) protein (156aa)
pts iia-like nitrogen-regulatory protein ptsn; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=CG_Rhodof_04
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHJ4_ACIET rbh
pts iia-like nitrogen-regulatory protein ptsn
cg1_0.2_scaffold_1246_c_16
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14606..15556
DNA (951bp) protein (317aa)
HPr kinase/phosphorylase; K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] Tax=CG_Rhodof_04
HPr kinase n=1 Tax=Curvibacter lanceolatus RepID=UPI00036BDBC0 rbh
HPr kinase/phosphorylase
cg1_0.2_scaffold_1246_c_17
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15608..16858
DNA (1251bp) protein (417aa)
putative RNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] Tax=CG_Rhodof_04
Putative RNA methylase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220M4_RHOFD rbh
putative RNA methylase
cg1_0.2_scaffold_1246_c_18
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16962..17366
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220M3_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1246_c_19
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17383..18816
DNA (1434bp) protein (478aa)
glutamate--putrescine ligase (EC:6.3.1.11); K01915 glutamine synthetase [EC:6.3.1.2] Tax=CG_Rhodof_04
glutamate--putrescine ligase (EC:6.3.1.11)
cg1_0.2_scaffold_1246_c_20
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18885..19109
DNA (225bp) protein (75aa)
HTH domain-containing addiction module n=1 Tax=Candidatus Regiella insecticola LSR1 RepID=E0WV51_9ENTR rbh
HTH domain-containing addiction module Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1246_c_21
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19099..19533
DNA (435bp) protein (145aa)
PIN domain-containing addiction module n=1 Tax=Candidatus Regiella insecticola LSR1 RepID=E0WV50_9ENTR rbh
twitching motility protein PilT Tax=CG_Rhodof_04
putative nucleic-acid-binding protein contains PIN domain
cg1_0.2_scaffold_1246_c_22
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19578..20963
DNA (1386bp) protein (462aa)
aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=CG_Rhodof_04
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00035E2554 rbh
aminotransferase
cg1_0.2_scaffold_1246_c_23
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21012..21815
DNA (804bp) protein (268aa)
YgfB n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220J9_RHOFD rbh
YecA; K07039 uncharacterized protein Tax=CG_Rhodof_04
YecA
cg1_0.2_scaffold_1246_c_24
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21816..22823)
DNA (1008bp) protein (336aa)
lipopolysaccharide heptosyltransferase II; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=CG_Rhodof_04
Lipopolysaccharide heptosyltransferase II n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12H22_POLSJ rbh
lipopolysaccharide heptosyltransferase II
cg1_0.2_scaffold_1246_c_25
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23014..23217)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221P4_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1246_c_26
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23342..24292)
DNA (951bp) protein (317aa)
branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=CG_Rhodof_04
Branched-chain amino acid aminotransferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T768_ACIDE rbh
branched-chain amino acid aminotransferase
cg1_0.2_scaffold_1246_c_27
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24384..25775)
DNA (1392bp) protein (464aa)
periplasmic sensor signal transduction histidine kinase; K07645 two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] Tax=CG_Rhodof_04
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221P7_RHOFD rbh
periplasmic sensor signal transduction histidine kinase
cg1_0.2_scaffold_1246_c_28
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25784..26461)
DNA (678bp) protein (226aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221P8_RHOFD rbh
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator Tax=CG_Rhodof_04
two component transcriptional regulator
cg1_0.2_scaffold_1246_c_29
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26494..27165)
DNA (672bp) protein (224aa)
Cytochrome B561 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221P9_RHOFD rbh
cytochrome B561 Tax=CG_Rhodof_04
cytochrome B561
cg1_0.2_scaffold_1246_c_30
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27174..27503)
DNA (330bp) protein (110aa)
Diheme cytochrome c n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VMG9_POLNA
diheme cytochrome c Tax=CG_Rhodof_04
diheme cytochrome c
Displaying items 1-30 of 32 in total

View Taxonomy