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cg1_0.2_scaffold_4172_c

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_4172_c_1
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(845..1276)
DNA (432bp) protein (144aa)
Transcriptional regulator, MerR family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BQ6_POLSJ rbh
MerR family transcriptional regulator Tax=CG_Rhodof_04
MerR family transcriptional regulator
cg1_0.2_scaffold_4172_c_2
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1389..1730)
DNA (342bp) protein (114aa)
Integration host factor subunit alpha n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y6E8_9BURK rbh
ihfA; integration host factor subunit alpha; K04764 integration host factor subunit alpha Tax=CG_Rhodof_04
ihfA; integration host factor subunit alpha
cg1_0.2_scaffold_4172_c_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1768..4191)
DNA (2424bp) protein (808aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=CG_Rhodof_04
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YS8_RHOFD rbh
cg1_0.2_scaffold_4172_c_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4282..5355)
DNA (1074bp) protein (358aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=CG_Rhodof_04
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=SYFA_RHOFD rbh
cg1_0.2_scaffold_4172_c_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5468..5827)
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y6F1_9BURK rbh
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=CG_Rhodof_04
rplT; 50S ribosomal protein L20
cg1_0.2_scaffold_4172_c_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5853..6056)
DNA (204bp) protein (68aa)
50S ribosomal protein L35 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y6F2_9BURK rbh
rpmI; 50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 Tax=CG_Rhodof_04
rpmI; 50S ribosomal protein L35
cg1_0.2_scaffold_4172_c_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6204..6728)
DNA (525bp) protein (175aa)
Translation initiation factor IF-3 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YT2_RHOFD rbh
translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=CG_Rhodof_04
translation initiation factor IF-3
cg1_0.2_scaffold_4172_c_8
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6864..8792)
DNA (1929bp) protein (643aa)
thrS; threonyl-tRNA ligase (EC:6.1.1.3) Tax=CG_Rhodof_04
thrS; threonyl-tRNA ligase (EC:6.1.1.3)
threonyl-tRNA synthetase n=1 Tax=Curvibacter lanceolatus RepID=UPI00036295B6 rbh
cg1_0.2_scaffold_4172_c_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9085..10404)
DNA (1320bp) protein (440aa)
isocitrate lyase; K01637 isocitrate lyase [EC:4.1.3.1] Tax=CG_Rhodof_04
Isocitrate lyase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YT4_RHOFD rbh
isocitrate lyase
cg1_0.2_scaffold_4172_c_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10665..11996)
DNA (1332bp) protein (444aa)
L-glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] Tax=CG_Rhodof_04
L-glutamine synthetase (EC:6.3.1.2)
cg1_0.2_scaffold_4172_c_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12100..13569)
DNA (1470bp) protein (490aa)
aldehyde dehydrogenase (EC:1.2.1.3); K09472 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase [EC:1.2.1.-] Tax=CG_Rhodof_04
aldehyde dehydrogenase (EC:1.2.1.3)
cg1_0.2_scaffold_4172_c_12
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13620..13820)
DNA (201bp) protein (67aa)
Transposase, IS204/IS1001/IS1096/IS1165 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q11ZA3_POLSJ rbh
transposase, IS204/IS1001/IS1096/IS1165
transposase, IS204/IS1001/IS1096/IS1165 Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
Displaying 12 items

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