ggKbase home page

cg1_0.2_scaffold_1361_c

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_1361_c_1
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104..1414)
DNA (1311bp) protein (437aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=CG_Rhodof_04
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TF4_RHOFD rbh
cg1_0.2_scaffold_1361_c_2
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1443..2111)
DNA (669bp) protein (223aa)
Peptidase M50 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12ET6_POLSJ rbh
peptidase M50 Tax=CG_Rhodof_04
peptidase M50
cg1_0.2_scaffold_1361_c_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2135..2758)
DNA (624bp) protein (208aa)
Sua5/YciO/YrdC/YwlC n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TF6_RHOFD rbh
Sua5/YciO/YrdC/YwlC; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=CG_Rhodof_04
Sua5/YciO/YrdC/YwlC
cg1_0.2_scaffold_1361_c_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2815..3699)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TF7_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1361_c_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3704..4579)
DNA (876bp) protein (292aa)
PHP-like n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TF8_RHOFD rbh
PHP-like protein; K07053 Tax=CG_Rhodof_04
PHP-like protein
cg1_0.2_scaffold_1361_c_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4930..6447)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TI2_RHOFD rbh
hypothetical protein; K07793 putative tricarboxylic transport membrane protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1361_c_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6432..6908)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TI1_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1361_c_8
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6924..8645)
DNA (1722bp) protein (574aa)
Type II secretion system protein E n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TI0_RHOFD rbh
type II secretion system protein E; K02454 general secretion pathway protein E Tax=CG_Rhodof_04
type II secretion system protein E
cg1_0.2_scaffold_1361_c_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8744..9634)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TH9_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1361_c_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9736..11205
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GTL7_9BURK rbh
Uncharacterized protein Tax=CG_Rhodof_04
cg1_0.2_scaffold_1361_c_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11173..11940)
DNA (768bp) protein (256aa)
TatD-like protein deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=CG_Rhodof_04
TatD-related deoxyribonuclease n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TH3_RHOFD rbh
TatD-like protein deoxyribonuclease
cg1_0.2_scaffold_1361_c_12
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12058..12432)
DNA (375bp) protein (125aa)
Tax=CG_Rhodof_04
cg1_0.2_scaffold_1361_c_13
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12453..13244)
DNA (792bp) protein (264aa)
lipoprotein releasing system ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=CG_Rhodof_04
Lipoprotein releasing system, ATP-binding protein n=1 Tax=Variovorax sp. CF313 RepID=J3CF89_9BURK rbh
lipoprotein releasing system ATP-binding protein
cg1_0.2_scaffold_1361_c_14
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13237..14493)
DNA (1257bp) protein (419aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TG2_RHOFD rbh
LolC/E family lipoprotein releasing system, transmembrane protein; K09808 lipoprotein-releasing system permease protein Tax=CG_Rhodof_04
LolC/E family lipoprotein releasing system, transmembrane protein
cg1_0.2_scaffold_1361_c_15
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14527..14946)
DNA (420bp) protein (140aa)
PilT protein domain protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GB96_GEOUR rbh
PilT domain-containing protein Tax=CG_Rhodof_04
PilT domain-containing protein
cg1_0.2_scaffold_1361_c_16
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14943..15164)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FNJ2_METHJ rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1361_c_17
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15229..16176
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TG1_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1361_c_18
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16234..16791)
DNA (558bp) protein (186aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=CG_Rhodof_04
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21V09_RHOFD rbh
cg1_0.2_scaffold_1361_c_19
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16838..17710)
DNA (873bp) protein (291aa)
glucose-1-phosphate thymidylyltransferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=CG_Rhodof_04
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21V10_RHOFD rbh
glucose-1-phosphate thymidylyltransferase
cg1_0.2_scaffold_1361_c_20
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17730..18671)
DNA (942bp) protein (314aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=CG_Rhodof_04
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124X7_POLSJ rbh
cg1_0.2_scaffold_1361_c_21
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18668..19009)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P6V1_AROAE rbh
virulence-associated protein VapC Tax=CG_Rhodof_04
predicted nucleic acid-binding protein, contains PIN domain
cg1_0.2_scaffold_1361_c_22
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19083..19340)
DNA (258bp) protein (86aa)
SpoVT/AbrB domain-containing protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZVQ3_9RHOO rbh
SpoVT/AbrB domain protein Tax=CG_Rhodof_04
virulence-associated protein and related protein
cg1_0.2_scaffold_1361_c_23
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19378..20451)
DNA (1074bp) protein (358aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=CG_Rhodof_04
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JIV5_BURVG rbh
cg1_0.2_scaffold_1361_c_24
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20531..22495)
DNA (1965bp) protein (655aa)
ABC transporter related n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WT7_RHOFD rbh
ABC transporter-like protein; K06158 ATP-binding cassette, subfamily F, member 3 Tax=CG_Rhodof_04
ABC transporter-like protein
cg1_0.2_scaffold_1361_c_25
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22566..23459)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EEY2_9BACT rbh
DNA methyltransferase-like protein Tax=CG_Rhodof_04
DNA methyltransferase-like protein
cg1_0.2_scaffold_1361_c_26
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23456..24643)
DNA (1188bp) protein (396aa)
succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] Tax=CG_Rhodof_04
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CVQ4_9BACT rbh
succinyl-diaminopimelate desuccinylase
cg1_0.2_scaffold_1361_c_27
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24646..25824)
DNA (1179bp) protein (393aa)
Twitching motility protein PilU n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N8T4_9BURK rbh
pilU-1; twitching motility protein PilU Tax=CG_Rhodof_04
pilU-1; twitching motility protein PilU
Displaying 27 items

View Taxonomy