ggKbase home page

cg1_0.2_scaffold_1369_c

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_1369_c_1
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..227
DNA (225bp) protein (75aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=CG_Rhodof_04
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YBK3_9BURK rbh
cg1_0.2_scaffold_1369_c_2
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

254..1870
DNA (1617bp) protein (539aa)
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=CG_Rhodof_04
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=GUAA_RHOFD rbh
cg1_0.2_scaffold_1369_c_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1963..3216)
DNA (1254bp) protein (418aa)
adenylate/guanylate cyclase with integral membrane and GAF sensors (EC:4.6.1.2) Tax=CG_Rhodof_04
adenylate/guanylate cyclase with integral membrane and GAF sensors (EC:4.6.1.2)
guanylate cyclase n=1 Tax=Nevskia ramosa RepID=UPI0003B4F7CD rbh
cg1_0.2_scaffold_1369_c_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3361..4401
DNA (1041bp) protein (347aa)
CMP/dCMP deaminase, zinc-binding n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21W49_RHOFD rbh
CMP/dCMP deaminase Tax=CG_Rhodof_04
CMP/dCMP deaminase
cg1_0.2_scaffold_1369_c_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4398..5327
DNA (930bp) protein (310aa)
muramoyltetrapeptide carboxypeptidase (EC:3.4.17.13); K01297 muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] Tax=CG_Rhodof_04
muramoyltetrapeptide carboxypeptidase (EC:3.4.17.13)
Muramoyltetrapeptide carboxypeptidase n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WQV0_VEREI rbh
cg1_0.2_scaffold_1369_c_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5386..6300
DNA (915bp) protein (305aa)
Adenylate cyclase n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N5Y8_9BURK rbh
adenylate cyclase Tax=CG_Rhodof_04
adenylate cyclase
cg1_0.2_scaffold_1369_c_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6378..7043)
DNA (666bp) protein (222aa)
Ankyrin n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21W72_RHOFD rbh
ankyrin; K06867 Tax=CG_Rhodof_04
ankyrin
cg1_0.2_scaffold_1369_c_8
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7040..7852)
DNA (813bp) protein (271aa)
deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=CG_Rhodof_04
Deoxyribonuclease-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXT8_RAMTT rbh
deoxyribonuclease
cg1_0.2_scaffold_1369_c_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7974..8996)
DNA (1023bp) protein (341aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=CG_Rhodof_04
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA-directed DNA polymerase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21W75_RHOFD rbh
cg1_0.2_scaffold_1369_c_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8993..9640)
DNA (648bp) protein (216aa)
tmk; thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=CG_Rhodof_04
tmk; thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=KTHY_RHOFD rbh
cg1_0.2_scaffold_1369_c_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9652..10635)
DNA (984bp) protein (328aa)
Aminodeoxychorismate lyase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21W77_RHOFD rbh
aminodeoxychorismate lyase; K07082 UPF0755 protein Tax=CG_Rhodof_04
aminodeoxychorismate lyase
cg1_0.2_scaffold_1369_c_12
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10683..11612
DNA (930bp) protein (310aa)
Glycine cleavage T protein (Aminomethyl transferase) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21W78_RHOFD rbh
glycine cleavage T protein (aminomethyl transferase); K06980 Tax=CG_Rhodof_04
glycine cleavage T protein (aminomethyl transferase)
cg1_0.2_scaffold_1369_c_13
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11637..12746)
DNA (1110bp) protein (370aa)
Oxidoreductase-like n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UU7_RHOFD rbh
oxidoreductase-like protein Tax=CG_Rhodof_04
oxidoreductase-like protein
cg1_0.2_scaffold_1369_c_14
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12812..13717
DNA (906bp) protein (302aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UU6_RHOFD rbh
putative acyltransferase Tax=CG_Rhodof_04
putative acyltransferase
cg1_0.2_scaffold_1369_c_15
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13761..14339)
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YB78_9BURK rbh
MOSC domain-containing protein Tax=CG_Rhodof_04
MOSC domain-containing protein
cg1_0.2_scaffold_1369_c_16
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14501..17659)
DNA (3159bp) protein (1053aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q478L4_DECAR rbh
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Tax=CG_Rhodof_04
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
cg1_0.2_scaffold_1369_c_17
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17656..18486)
DNA (831bp) protein (277aa)
putative periplasmic binding protein; K02044 phosphonate transport system substrate-binding protein Tax=CG_Rhodof_04
Putative uncharacterized protein id=1314843 bin=GWE1_T_denit_62_9 species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
putative periplasmic binding protein
cg1_0.2_scaffold_1369_c_18
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18702..19895)
DNA (1194bp) protein (398aa)
ATPase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035E5F5F rbh
hypothetical protein; K07133 Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1369_c_19
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20014..20352)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome PF8_9ZZZZ">RepID=E6QPF8_9ZZZZ rbh
hypothetical protein Tax=CG_Rhodof_04
HicB
cg1_0.2_scaffold_1369_c_20
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20349..20603)
DNA (255bp) protein (85aa)
HicA protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCV6_9GAMM rbh
HicA family protein Tax=CG_Rhodof_04
HicA protein
cg1_0.2_scaffold_1369_c_21
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20705..21640
DNA (936bp) protein (312aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YB37_9BURK rbh
alpha/beta hydrolase fold protein Tax=CG_Rhodof_04
alpha/beta hydrolase fold protein
cg1_0.2_scaffold_1369_c_22
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21645..22229
DNA (585bp) protein (195aa)
Chromate transporter n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UT5_RHOFD rbh
chromate transporter; K07240 chromate transporter Tax=CG_Rhodof_04
chromate transporter
cg1_0.2_scaffold_1369_c_23
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22226..22822
DNA (597bp) protein (199aa)
Chromate transporter n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UT4_RHOFD rbh
chromate transporter; K07240 chromate transporter Tax=CG_Rhodof_04
chromate transporter
cg1_0.2_scaffold_1369_c_24
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22842..23201)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21W98_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1369_c_25
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23222..23995)
DNA (774bp) protein (258aa)
RNA methyltransferase TrmH; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=CG_Rhodof_04
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21W99_RHOFD rbh
RNA methyltransferase TrmH
cg1_0.2_scaffold_1369_c_26
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24005..24379)
DNA (375bp) protein (125aa)
Transcriptional regulator, ArsR family n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) RepID=A4SVP8_POLSQ rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1369_c_27
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24391..24708)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PTV6_9ZZZZ rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1369_c_28
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24761..25726)
DNA (966bp) protein (322aa)
Alpha/beta hydrolase fold-3 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VV3_RHOFD rbh
alpha/beta hydrolase fold-3 protein Tax=CG_Rhodof_04
alpha/beta hydrolase fold-3 protein
Displaying 28 items

View Taxonomy