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cg1_0.2_scaffold_1330_c

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_1330_c_1
Thermodesulfobacterium geofontis, Thermodesulfobacterium, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

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comp(2..67)
DNA (66bp) protein (22aa)
Uncharacterized protein n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C3J0_THEGP
hypothetical protein; K07133
Uncharacterized protein; TaxID=795359 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfobacterium.;" source="Thermodesulfobacterium geofontis (strain OPB45).;"
cg1_0.2_scaffold_1330_c_2
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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238..960
DNA (723bp) protein (241aa)
hypothetical protein; K07133 Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1330_c_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1078..2322)
DNA (1245bp) protein (415aa)
putative oxygen-independent coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=CG_Rhodof_04
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XZ2_RHOFD rbh
putative oxygen-independent coproporphyrinogen III oxidase
cg1_0.2_scaffold_1330_c_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2348..2947)
DNA (600bp) protein (200aa)
putative deoxyribonucleotide triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=CG_Rhodof_04
Non-canonical purine NTP pyrophosphatase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=NTPA_RHOFD rbh
putative deoxyribonucleotide triphosphate pyrophosphatase
cg1_0.2_scaffold_1330_c_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2989..3720)
DNA (732bp) protein (244aa)
Ribonuclease PH n=1 Tax=Polaromonas sp. CF318 RepID=J3CSL1_9BURK rbh
ribonuclease ph Tax=CG_Rhodof_04
ribonuclease ph
cg1_0.2_scaffold_1330_c_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3743..4594)
DNA (852bp) protein (284aa)
Protein serine/threonine phosphatases n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XZ5_RHOFD rbh
protein serine/threonine phosphatase Tax=CG_Rhodof_04
protein serine/threonine phosphatase
cg1_0.2_scaffold_1330_c_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4656..5657)
DNA (1002bp) protein (334aa)
Serine/threonine protein kinase n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N5U4_9BURK rbh
serine/threonine protein kinase Tax=CG_Rhodof_04
serine/threonine protein kinase
cg1_0.2_scaffold_1330_c_8
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5735..6652
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XZ7_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1330_c_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6658..7284
DNA (627bp) protein (209aa)
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] Tax=CG_Rhodof_04
gmk; guanylate kinase (EC:2.7.4.8)
guanylate kinase n=1 Tax=Variovorax paradoxus RepID=UPI00036A050E rbh
cg1_0.2_scaffold_1330_c_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7311..7514
DNA (204bp) protein (68aa)
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] Tax=CG_Rhodof_04
DNA-directed RNA polymerase subunit omega n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y760_9BURK rbh
DNA-directed RNA polymerase subunit omega
cg1_0.2_scaffold_1330_c_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7612..9879
DNA (2268bp) protein (756aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=CG_Rhodof_04
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TP5_RHOFD rbh
cg1_0.2_scaffold_1330_c_12
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9869..10408
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T28_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1330_c_13
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10532..11866
DNA (1335bp) protein (445aa)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=MIAB_RHOFD rbh
(dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA Tax=CG_Rhodof_04
(dimethylallyl)adenosine tRNA methylthiotransferase
cg1_0.2_scaffold_1330_c_14
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11909..13282)
DNA (1374bp) protein (458aa)
Signal recognition particle protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T52_RHOFD rbh
signal recognition particle protein; K03106 signal recognition particle subunit SRP54 Tax=CG_Rhodof_04
signal recognition particle protein
cg1_0.2_scaffold_1330_c_15
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13359..14162
DNA (804bp) protein (268aa)
Cytochrome c assembly protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T51_RHOFD rbh
cytochrome c assembly protein Tax=CG_Rhodof_04
cytochrome c assembly protein
cg1_0.2_scaffold_1330_c_16
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14378..16051
DNA (1674bp) protein (558aa)
multi-sensor signal transduction histidine kinase; K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] Tax=CG_Rhodof_04
Multi-sensor signal transduction histidine kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T50_RHOFD rbh
multi-sensor signal transduction histidine kinase
cg1_0.2_scaffold_1330_c_17
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16048..17514
DNA (1467bp) protein (489aa)
Candidate response regulator, NtrC n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y015_RAMTT rbh
response regulator NtrC; K02667 two-component system, NtrC family, response regulator PilR Tax=CG_Rhodof_04
response regulator NtrC
cg1_0.2_scaffold_1330_c_18
CG_Rhodof_03, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17501..18094
DNA (594bp) protein (198aa)
Negative regulator of AmpC, AmpD n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12EI1_POLSJ rbh
ampD; putative 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD Tax=CG_Rhodof_03
N-acetyl-anhydromuranmyl-L-alanine amidase
cg1_0.2_scaffold_1330_c_19
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18175..21624)
DNA (3450bp) protein (1150aa)
methylmalonyl-CoA mutase (EC:5.4.99.2); K11942 methylmalonyl-CoA mutase [EC:5.4.99.2] Tax=CG_Rhodof_04
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124U5_POLSJ rbh
cg1_0.2_scaffold_1330_c_20
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21777..22223
DNA (447bp) protein (149aa)
Rhodanese-like n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SD7_RHOFD rbh
rhodanese-like protein Tax=CG_Rhodof_04
rhodanese-like protein
cg1_0.2_scaffold_1330_c_21
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22266..23030
DNA (765bp) protein (255aa)
pantothenate kinase (EC:2.7.1.33); K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=CG_Rhodof_04
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=COAX_RHOFD rbh
cg1_0.2_scaffold_1330_c_22
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23205..24101)
DNA (897bp) protein (299aa)
H+-transporting two-sector ATPase subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] Tax=CG_Rhodof_04
H+-transporting two-sector ATPase, gamma subunit n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VPQ7_POLNA rbh
H+-transporting two-sector ATPase subunit gamma
cg1_0.2_scaffold_1330_c_23
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24098..25693)
DNA (1596bp) protein (532aa)
F0F1 ATP synthase subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] Tax=CG_Rhodof_04
F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha 2 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=ATPA2_RHOFD rbh
cg1_0.2_scaffold_1330_c_24
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25690..26406)
DNA (717bp) protein (239aa)
H+-transporting two-sector ATPase subunit B/B'; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] Tax=CG_Rhodof_04
ATP synthase subunit b n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VPQ9_POLNA rbh
H+-transporting two-sector ATPase subunit B/B'
Displaying 24 items

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