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cg1_0.2_scaffold_4889_c

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_4889_c_1
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(299..1897)
DNA (1599bp) protein (533aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y39_RHOFD rbh
cg1_0.2_scaffold_4889_c_2
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1981..2217)
DNA (237bp) protein (79aa)
Helix-turn-helix, Fis-type n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y40_RHOFD rbh
helix-turn-helix, Fis-type; K03557 Fis family transcriptional regulator, factor for inversion stimulation protein Tax=CG_Rhodof_04
helix-turn-helix, Fis-type
cg1_0.2_scaffold_4889_c_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2214..3260)
DNA (1047bp) protein (349aa)
dihydrouridine synthase TIM-barrel protein nifR3; K05540 tRNA-dihydrouridine synthase B [EC:1.-.-.-] Tax=CG_Rhodof_04
tRNA-dihydrouridine synthase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12EG0_POLSJ rbh
dihydrouridine synthase TIM-barrel protein nifR3
cg1_0.2_scaffold_4889_c_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3439..3933
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y42_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_4889_c_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4099..5187)
DNA (1089bp) protein (363aa)
Ribosome-binding ATPase YchF n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VSN2_POLNA rbh
ychF; GTP-dependent nucleic acid-binding protein EngD; K06942 Tax=CG_Rhodof_04
ychF; GTP-dependent nucleic acid-binding protein EngD
cg1_0.2_scaffold_4889_c_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5271..6392
DNA (1122bp) protein (374aa)
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y45_RHOFD rbh
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase Tax=CG_Rhodof_04
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
cg1_0.2_scaffold_4889_c_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6464..7189
DNA (726bp) protein (242aa)
thiol:disulfide interchange protein DsbC; K03981 thiol:disulfide interchange protein DsbC [EC:5.3.4.1] Tax=CG_Rhodof_04
Thiol:disulfide interchange protein DsbC n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y46_RHOFD rbh
thiol:disulfide interchange protein DsbC
cg1_0.2_scaffold_4889_c_8
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7195..9021
DNA (1827bp) protein (609aa)
Peptidase M61 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y47_RHOFD rbh
peptidase M61 Tax=CG_Rhodof_04
peptidase M61
cg1_0.2_scaffold_4889_c_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9084..9863
DNA (780bp) protein (260aa)
enoyl-CoA hydratase/isomerase; K01692 enoyl-CoA hydratase [EC:4.2.1.17] Tax=CG_Rhodof_04
Short chain enoyl-CoA hydratase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y48_RHOFD rbh
enoyl-CoA hydratase/isomerase
cg1_0.2_scaffold_4889_c_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10360..10857
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EDZ1_RUNSL rbh
protein of unknown function DUF985 Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_4889_c_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11484..12173)
DNA (690bp) protein (230aa)
phosphoglycolate phosphatase (EC:3.1.3.18); K01091 phosphoglycolate phosphatase [EC:3.1.3.18] Tax=CG_Rhodof_04
phosphoglycolate phosphatase (EC:3.1.3.18)
phosphoglycolate phosphatase n=1 Tax=Acidovorax radicis RepID=UPI00023766D2 rbh
cg1_0.2_scaffold_4889_c_12
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12170..12472)
DNA (303bp) protein (101aa)
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64); K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] Tax=CG_Rhodof_04
bifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase (EC:2.1.1.64)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI00037DEA13
Displaying 12 items

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