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cg1_0.2_scaffold_317_c

Search features with annotation key words

Displaying items 31-60 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_317_c_31
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34370..34726
DNA (357bp) protein (119aa)
Phenol hydroxylase conserved region protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUN0_ALIDB rbh
phenol hydroxylase conserved region protein Tax=CG_Rhodof_04
phenol hydroxylase
cg1_0.2_scaffold_317_c_32
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34846..35919
DNA (1074bp) protein (358aa)
Phenol 2-monooxygenase (EC:1.14.13.7) Tax=CG_Rhodof_04
Oxidoreductase FAD-binding domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUN1_ALIDB rbh
oxidoreductase FAD-binding domain-containing protein
cg1_0.2_scaffold_317_c_33
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36055..37323
DNA (1269bp) protein (423aa)
Putative substrate-binding component of ABC transporter n=1 Tax=uncultured bacterium RepID=U6C335_9BACT rbh
ABC transporter substrate-binding protein Tax=CG_Rhodof_04
putative ABC transporter substrate-binding protein
cg1_0.2_scaffold_317_c_34
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37393..38112
DNA (720bp) protein (240aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti RepID=UPI0003680E3E rbh
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=CG_Rhodof_04
Branched-chain amino acid transport ATP-binding protein LivG
cg1_0.2_scaffold_317_c_35
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38109..38807
DNA (699bp) protein (233aa)
High-affinity branched-chain amino acid transport protein (ABC superfamily, atp_bind) n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0S9W9_9BRAD rbh
livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=CG_Rhodof_04
livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein
cg1_0.2_scaffold_317_c_36
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38811..39680
DNA (870bp) protein (290aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Pseudomonas sp. GM49 RepID=J3GGQ6_9PSED rbh
ABC transporter permease Tax=CG_Rhodof_04
ABC transporter permease
cg1_0.2_scaffold_317_c_37
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39706..40713
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AFS2_PSERE rbh
hypothetical protein Tax=CG_Rhodof_04
Branched-chain amino acid transport system permease protein LivM
cg1_0.2_scaffold_317_c_38
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40710..41279
DNA (570bp) protein (190aa)
Hemerythrin HHE cation binding domain protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7P6_LEPCP
hemerythrin HHE cation-binding domain-containing protein Tax=CG_Rhodof_04
Branched-chain amino acid transport ATP-binding protein LivF
cg1_0.2_scaffold_317_c_39
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41283..42185
DNA (903bp) protein (301aa)
LysR family transcriptional regulator n=1 Tax=Pseudomonas sp. Chol1 RepID=K5Y8K7_9PSED rbh
LysR family transcriptional regulator Tax=CG_Rhodof_04
transcriptional regulator, LysR family
cg1_0.2_scaffold_317_c_40
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42221..42559
DNA (339bp) protein (113aa)
Ferredoxin n=2 Tax=Alicycliphilus denitrificans RepID=E8TUN2_ALIDB rbh
ferredoxin Tax=CG_Rhodof_04
ferredoxin
cg1_0.2_scaffold_317_c_41
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42581..43507
DNA (927bp) protein (309aa)
catechol 2,3 dioxygenase (EC:1.13.11.2); K00446 catechol 2,3-dioxygenase [EC:1.13.11.2] Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
catechol 2,3 dioxygenase (EC:1.13.11.2)
Catechol 2,3 dioxygenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TUN3_ALIDB rbh
cg1_0.2_scaffold_317_c_42
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43507..43938
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UVY7_PSEUP rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_317_c_43
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44033..45493
DNA (1461bp) protein (487aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8); K10217 aminomuconate-semialdehyde dehydrogenase [EC:1.2.1.32] Tax=CG_Rhodof_04
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
CbzG n=5 Tax=Pseudomonas RepID=Q2QCP2_9PSED rbh
cg1_0.2_scaffold_317_c_44
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45503..46378
DNA (876bp) protein (292aa)
2-hydroxymuconic semialdehyde hydrolase (EC:3.7.1.-) Tax=CG_Rhodof_04
2-hydroxymuconic semialdehyde hydrolase (EC:3.7.1.-)
2-hydroxymuconic semialdehyde hydrolase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SI41_METPP rbh
cg1_0.2_scaffold_317_c_45
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46459..47241
DNA (783bp) protein (261aa)
2-hydroxypent-2,4-dienoate hydratase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWH5_PSEUP rbh
2-hydroxypenta-2,4-dienoate hydratase Tax=CG_Rhodof_04
2-hydroxypenta-2,4-dienoate hydratase
cg1_0.2_scaffold_317_c_46
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47263..48174
DNA (912bp) protein (304aa)
acetaldehyde dehydrogenase (EC:1.2.1.10); K04073 acetaldehyde dehydrogenase [EC:1.2.1.10] Tax=CG_Rhodof_04
acetaldehyde dehydrogenase (EC:1.2.1.10)
Acetaldehyde dehydrogenase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=ACDH_POLNA rbh
cg1_0.2_scaffold_317_c_47
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48193..49218
DNA (1026bp) protein (342aa)
4-hydroxy-2-ketovalerate aldolase; K01666 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] Tax=CG_Rhodof_04
4-hydroxy-2-oxovalerate aldolase n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=HOA_VEREI rbh
4-hydroxy-2-ketovalerate aldolase
cg1_0.2_scaffold_317_c_48
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49241..50029
DNA (789bp) protein (263aa)
4-oxalocrotonate decarboxylase (EC:4.1.1.77); K01617 4-oxalocrotonate decarboxylase [EC:4.1.1.77] Tax=CG_Rhodof_04
4-oxalocrotonate decarboxylase n=2 Tax=Pandoraea RepID=V5UDN1_9BURK rbh
4-oxalocrotonate decarboxylase
cg1_0.2_scaffold_317_c_49
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50054..50245
DNA (192bp) protein (64aa)
4-oxalocrotonate tautomerase; K01821 4-oxalocrotonate tautomerase [EC:5.3.2.-] Tax=CG_Rhodof_04
4-oxalocrotonate tautomerase family enzyme n=2 Tax=Ralstonia pickettii RepID=B2UJF0_RALPJ rbh
4-oxalocrotonate tautomerase
cg1_0.2_scaffold_317_c_50
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50295..50540
DNA (246bp) protein (82aa)
TRAP C4-dicarboxylate transport system permease DctM n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LQ21_9PROT
dctM2; TRAP dicarboxylate transporter subunit DctM Tax=CG_Rhodof_04
TRAP C4-dicarboxylate transport system permease DctM
cg1_0.2_scaffold_317_c_51
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50592..51215)
DNA (624bp) protein (208aa)
Cytoplasmic chaperone TorD n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TD1_RHOFD rbh
cytoplasmic chaperone TorD Tax=CG_Rhodof_04
cytoplasmic chaperone TorD
cg1_0.2_scaffold_317_c_52
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51212..53191)
DNA (1980bp) protein (660aa)
4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TD0_RHOFD rbh
4Fe-4S ferredoxin Tax=CG_Rhodof_04
4Fe-4S ferredoxin
cg1_0.2_scaffold_317_c_53
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53196..53987)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TC9_RHOFD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD70974.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireduce
cg1_0.2_scaffold_317_c_54
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53980..54555)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TC8_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_317_c_55
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54691..57852)
DNA (3162bp) protein (1054aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R50_RHOFD rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=CG_Rhodof_04
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
cg1_0.2_scaffold_317_c_56
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57849..59435)
DNA (1587bp) protein (529aa)
Methyl-accepting chemotaxis sensory transducer with Cache sensor n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXU5_VARPS rbh
methyl-accepting chemotaxis sensory transducer with Cache sensor; K03406 methyl-accepting chemotaxis protein Tax=CG_Rhodof_04
methyl-accepting chemotaxis sensory transducer with Cache sensor
cg1_0.2_scaffold_317_c_57
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59636..60721
DNA (1086bp) protein (362aa)
Putative PAS/PAC sensor protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y83_RHOFD rbh
putative PAS/PAC sensor protein Tax=CG_Rhodof_04
putative PAS/PAC sensor protein
cg1_0.2_scaffold_317_c_58
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60703..61356
DNA (654bp) protein (218aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Acidovorax sp. CF316 RepID=J1EG11_9BURK rbh
two component LuxR family transcriptional regulator Tax=CG_Rhodof_04
two component LuxR family transcriptional regulator
cg1_0.2_scaffold_317_c_59
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61372..62457)
DNA (1086bp) protein (362aa)
tartrate dehydrogenase (EC:1.1.1.93); K07246 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] Tax=CG_Rhodof_04
tartrate dehydrogenase (EC:1.1.1.93)
Tartrate dehydrogenase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21W84_RHOFD rbh
cg1_0.2_scaffold_317_c_60
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62474..63355)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21W85_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
Displaying items 31-60 of 120 in total

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