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cg1_0.2_scaffold_317_c

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_317_c_1
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1586)
DNA (1584bp) protein (528aa)
3-hydroxyacyl-CoA dehydrogenase; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] Tax=CG_Rhodof_04
3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VV0_RHOFD rbh
3-hydroxyacyl-CoA dehydrogenase
cg1_0.2_scaffold_317_c_2
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2028..2261
DNA (234bp) protein (78aa)
50S ribosomal protein L28 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9A9_9BURK rbh
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=CG_Rhodof_04
rpmB; 50S ribosomal protein L28
cg1_0.2_scaffold_317_c_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2286..2456
DNA (171bp) protein (57aa)
50S ribosomal protein L33 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQS7_9BURK rbh
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 Tax=CG_Rhodof_04
rpmG; 50S ribosomal protein L33
cg1_0.2_scaffold_317_c_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2560..3753)
DNA (1194bp) protein (398aa)
fatty acid desaturase; K00507 stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1] Tax=CG_Rhodof_04
Fatty acid desaturase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TL2_RHOFD rbh
fatty acid desaturase
cg1_0.2_scaffold_317_c_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3792..5099)
DNA (1308bp) protein (436aa)
Fmu (Sun); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=CG_Rhodof_04
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9A6_9BURK rbh
Fmu (Sun)
cg1_0.2_scaffold_317_c_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5174..6640
DNA (1467bp) protein (489aa)
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TL0_RHOFD rbh
RND efflux system outer membrane lipoprotein NodT Tax=CG_Rhodof_04
RND efflux system outer membrane lipoprotein NodT
cg1_0.2_scaffold_317_c_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6660..7967
DNA (1308bp) protein (436aa)
Secretion protein HlyD n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TK9_RHOFD rbh
secretion protein HlyD; K02005 HlyD family secretion protein Tax=CG_Rhodof_04
secretion protein HlyD
cg1_0.2_scaffold_317_c_8
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7964..8701
DNA (738bp) protein (246aa)
ABC transporter related n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TK8_RHOFD rbh
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein Tax=CG_Rhodof_04
ABC transporter-like protein
cg1_0.2_scaffold_317_c_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8691..9893
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TK7_RHOFD rbh
hypothetical protein; K02004 putative ABC transport system permease protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_317_c_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9972..10376)
DNA (405bp) protein (135aa)
Globin n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KVD3_9BURK rbh
hypothetical protein; K06886 hemoglobin Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_317_c_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10437..13490)
DNA (3054bp) protein (1018aa)
Type III restriction protein res subunit (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZYP9_9ZZZZ rbh
restriction endonuclease Tax=CG_Rhodof_04
restriction endonuclease
cg1_0.2_scaffold_317_c_12
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13487..13879)
DNA (393bp) protein (131aa)
Nucleotidyltransferase n=3 Tax=Geobacillus RepID=S7SRY5_9BACI
putative nucleotidyltransferase substrate binding protein Tax=CG_Rhodof_04
putative nucleotidyltransferase substrate binding protein
cg1_0.2_scaffold_317_c_13
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13882..15981)
DNA (2100bp) protein (700aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72) Tax=CG_Rhodof_04
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
DNA methylase N-4/N-6 domain-containing protein n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6WPK2_9ALTE rbh
cg1_0.2_scaffold_317_c_14
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16139..18664)
DNA (2526bp) protein (842aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TD9_RHOFD rbh
hypothetical protein; K02004 putative ABC transport system permease protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_317_c_15
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18863..19714)
DNA (852bp) protein (284aa)
Formate dehydrogenase, subunit FdhD n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TD8_RHOFD rbh
formate dehydrogenase subunit FdhD; K02379 FdhD protein Tax=CG_Rhodof_04
formate dehydrogenase subunit FdhD
cg1_0.2_scaffold_317_c_16
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19720..20076)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002378674 rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_317_c_17
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20094..21275)
DNA (1182bp) protein (394aa)
Formate dehydrogenase gamma subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TD6_RHOFD rbh
formate dehydrogenase subunit gamma; K00127 formate dehydrogenase, gamma subunit Tax=CG_Rhodof_04
formate dehydrogenase subunit gamma
cg1_0.2_scaffold_317_c_18
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21288..21509)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ELE0_9BACT rbh
putative lipoprotein Tax=CG_Rhodof_04
putative lipoprotein
cg1_0.2_scaffold_317_c_19
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21506..22129)
DNA (624bp) protein (208aa)
4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TD4_RHOFD rbh
4Fe-4S ferredoxin; K00124 formate dehydrogenase, beta subunit Tax=CG_Rhodof_04
4Fe-4S ferredoxin
cg1_0.2_scaffold_317_c_20
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22132..25095)
DNA (2964bp) protein (988aa)
twin-arginine translocation pathway signal protein; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=CG_Rhodof_04
Twin-arginine translocation pathway signal n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TD3_RHOFD rbh
twin-arginine translocation pathway signal protein
cg1_0.2_scaffold_317_c_21
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25167..25373)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002D3BCFE rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_317_c_22
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25496..26569
DNA (1074bp) protein (358aa)
TRAP transporter solute receptor n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJ97_9BRAD rbh
extracellular solute-binding protein Tax=CG_Rhodof_04
extracellular solute-binding protein
cg1_0.2_scaffold_317_c_23
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26559..27104
DNA (546bp) protein (182aa)
TRAP-type C4-dicarboxylate transport system, small permease component n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4XZ77_9PROT rbh
dctQ4; TRAP dicarboxylate transporter subunit DctQ Tax=CG_Rhodof_04
dctQ4; TRAP dicarboxylate transporter subunit DctQ
cg1_0.2_scaffold_317_c_24
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27101..28393
DNA (1293bp) protein (431aa)
TRAP dicarboxylate transporter DctM subunit n=2 Tax=Bradyrhizobiaceae RepID=F7QJ95_9BRAD rbh
dctM2; TRAP dicarboxylate transporter subunit DctM Tax=CG_Rhodof_04
dctM2; TRAP dicarboxylate transporter subunit DctM
cg1_0.2_scaffold_317_c_25
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28407..29117)
DNA (711bp) protein (237aa)
Transcriptional regulator, GntR family n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WLM9_VEREI rbh
GntR family transcriptional regulator Tax=CG_Rhodof_04
GntR family transcriptional regulator
cg1_0.2_scaffold_317_c_26
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29133..30842)
DNA (1710bp) protein (570aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WLM8_VEREI rbh
sigma-54 dependent trancsriptional regulator Tax=CG_Rhodof_04
sigma-54 dependent trancsriptional regulator
cg1_0.2_scaffold_317_c_27
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31157..31435
DNA (279bp) protein (93aa)
Phenol hydroxylase subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TUM6_ALIDB rbh
phenol hydroxylase subunit Tax=CG_Rhodof_04
phenol hydroxylase subunit
cg1_0.2_scaffold_317_c_28
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31469..32467
DNA (999bp) protein (333aa)
Phenol 2-monooxygenase (EC:1.14.13.7) Tax=CG_Rhodof_04
phenol 2-monooxygenase (EC:1.14.13.7)
Phenol 2-monooxygenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEI4_ALIDK rbh
cg1_0.2_scaffold_317_c_29
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32479..32748
DNA (270bp) protein (90aa)
Monooxygenase component MmoB/DmpM n=2 Tax=Alicycliphilus denitrificans RepID=E8TUM8_ALIDB rbh
monooxygenase component mmob/dmpm Tax=CG_Rhodof_04
monooxygenase component mmob/dmpm
cg1_0.2_scaffold_317_c_30
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32797..34347
DNA (1551bp) protein (517aa)
Phenol 2-monooxygenase (EC:1.14.13.7); K08684 methane monooxygenase [EC:1.14.13.25] Tax=CG_Rhodof_04
phenol 2-monooxygenase (EC:1.14.13.7)
Phenol 2-monooxygenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEI6_ALIDK rbh
Displaying items 1-30 of 120 in total

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