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cg1_0.2_scaffold_782_c

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_782_c_1
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(321..1451)
DNA (1131bp) protein (377aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VP96_POLNA rbh
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=CG_Rhodof_04
extracellular ligand-binding receptor
cg1_0.2_scaffold_782_c_2
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1545..1880)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WL1_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_782_c_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1877..2314)
DNA (438bp) protein (146aa)
DNA polymerase III subunit chi; K02339 DNA polymerase III subunit chi [EC:2.7.7.7] Tax=CG_Rhodof_04
DNA polymerase III chi subunit, HolC n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WL2_RHOFD rbh
DNA polymerase III subunit chi
cg1_0.2_scaffold_782_c_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2311..3759)
DNA (1449bp) protein (483aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] Tax=CG_Rhodof_04
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase n=1 Tax=Acidovorax sp. CF316 RepID=J0K8J9_9BURK rbh
cg1_0.2_scaffold_782_c_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3792..4910
DNA (1119bp) protein (373aa)
Permease YjgP/YjgQ n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WL4_RHOFD rbh
permease YjgP/YjgQ; K07091 lipopolysaccharide export system permease protein Tax=CG_Rhodof_04
permease YjgP/YjgQ
cg1_0.2_scaffold_782_c_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4907..6013
DNA (1107bp) protein (369aa)
Permease YjgP/YjgQ n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WL5_RHOFD rbh
permease YjgP/YjgQ; K11720 lipopolysaccharide export system permease protein Tax=CG_Rhodof_04
permease YjgP/YjgQ
cg1_0.2_scaffold_782_c_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6020..6376
DNA (357bp) protein (119aa)
cobalamin (vitamin B12) biosynthesis CbiX protein; K03795 sirohydrochlorin cobaltochelatase [EC:4.99.1.3] Tax=CG_Rhodof_04
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YBH3_9BURK rbh
cobalamin (vitamin B12) biosynthesis CbiX protein
cg1_0.2_scaffold_782_c_8
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6407..7360
DNA (954bp) protein (318aa)
Transcriptional regulator, LysR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WL7_RHOFD rbh
transcriptional regulator CysB-like protein; K13634 LysR family transcriptional regulator, cys regulon transcriptional activator Tax=CG_Rhodof_04
transcriptional regulator CysB-like protein
cg1_0.2_scaffold_782_c_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7397..8548
DNA (1152bp) protein (384aa)
putative aminotransferase; K14287 methionine aminotransferase [EC:2.6.1.-] Tax=CG_Rhodof_04
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DZS3_9BACT rbh
putative aminotransferase
cg1_0.2_scaffold_782_c_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8558..10723
DNA (2166bp) protein (722aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21US5_RHOFD rbh
PAS/PAC sensor hybrid histidine kinase Tax=CG_Rhodof_04
PAS/PAC sensor hybrid histidine kinase
cg1_0.2_scaffold_782_c_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10781..11098)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YM4_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_782_c_12
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11185..11940
DNA (756bp) protein (252aa)
short-chain dehydrogenase/reductase SDR Tax=CG_Rhodof_04
short-chain dehydrogenase/reductase SDR id=12550284 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
short-chain dehydrogenase/reductase SDR
cg1_0.2_scaffold_782_c_13
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12020..13207
DNA (1188bp) protein (396aa)
beta-ketothiolase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=CG_Rhodof_04
beta-ketothiolase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XA6_RHOFD rbh
cg1_0.2_scaffold_782_c_14
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13237..15144
DNA (1908bp) protein (636aa)
signal transduction histidine kinase, nitrate/nitrite-specific, NarQ; K07673 two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] Tax=CG_Rhodof_04
Signal transduction histidine kinase, nitrate/nitrite-specific, NarQ n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XA7_RHOFD rbh
signal transduction histidine kinase, nitrate/nitrite-specific, NarQ
cg1_0.2_scaffold_782_c_15
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15156..15884
DNA (729bp) protein (243aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XA8_RHOFD rbh
two component LuxR family transcriptional regulator; K07684 two-component system, NarL family, nitrate/nitrite response regulator NarL Tax=CG_Rhodof_04
two component LuxR family transcriptional regulator
cg1_0.2_scaffold_782_c_16
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15891..16373)
DNA (483bp) protein (161aa)
Rrf2 family transcriptional regulator n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00036F8430 rbh
BadM/Rrf2 family transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor Tax=CG_Rhodof_04
BadM/Rrf2 family transcriptional regulator
cg1_0.2_scaffold_782_c_17
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16467..17906
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003788DD7 rbh
cytochrome c oxidase accessory protein CcoG Tax=CG_Rhodof_04
cytochrome c oxidase accessory protein CcoG
cg1_0.2_scaffold_782_c_18
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17925..18182
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XA9_RHOFD rbh
hypothetical protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
hypothetical protein
cg1_0.2_scaffold_782_c_19
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18112..19383)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CWH2_9BACT rbh
NnrS Tax=CG_Rhodof_04
NnrS
cg1_0.2_scaffold_782_c_20
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19428..19751)
DNA (324bp) protein (108aa)
4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21QW4_RHOFD rbh
4Fe-4S ferredoxin; K05524 ferredoxin Tax=CG_Rhodof_04
4Fe-4S ferredoxin
cg1_0.2_scaffold_782_c_21
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19785..21617)
DNA (1833bp) protein (611aa)
von Willebrand factor type A; K02448 nitric oxide reductase NorD protein Tax=CG_Rhodof_04
von Willebrand factor type A
cg1_0.2_scaffold_782_c_22
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21617..22627)
DNA (1011bp) protein (337aa)
Iron-sulfur cluster-binding protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TCH7_ACIDE rbh
iron-sulfur cluster-binding protein Tax=CG_Rhodof_04
iron-sulfur cluster-binding protein
cg1_0.2_scaffold_782_c_23
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22617..23405)
DNA (789bp) protein (263aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y7Z3_LEPCP rbh
ATPase; K04748 nitric oxide reductase NorQ protein Tax=CG_Rhodof_04
ATPase
cg1_0.2_scaffold_782_c_24
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23414..24853)
DNA (1440bp) protein (480aa)
cytochrome c oxidase subunit I; K04561 nitric oxide reductase subunit B [EC:1.7.2.5] Tax=CG_Rhodof_04
cytochrome c oxidase subunit I
cg1_0.2_scaffold_782_c_25
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24893..25330)
DNA (438bp) protein (146aa)
putative nitric-oxide reductase subunit C; K02305 nitric oxide reductase subunit C Tax=CG_Rhodof_04
putative nitric-oxide reductase subunit C
cg1_0.2_scaffold_782_c_26
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25368..25628)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21QW2_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_782_c_27
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25848..27095
DNA (1248bp) protein (416aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UQ1_RHOFD rbh
major facilitator transporter; K02575 MFS transporter, NNP family, nitrate/nitrite transporter Tax=CG_Rhodof_04
major facilitator transporter
cg1_0.2_scaffold_782_c_28
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27117..28745
DNA (1629bp) protein (543aa)
Nitrate/nitrite transporter n=1 Tax=sediment metagenome RepID=D9PET0_9ZZZZ rbh
nitrate/nitrite antiporter; K02575 MFS transporter, NNP family, nitrate/nitrite transporter Tax=CG_Rhodof_04
nitrate/nitrite antiporter
cg1_0.2_scaffold_782_c_29
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28890..29528
DNA (639bp) protein (213aa)
transcriptional regulator Tax=CG_Rhodof_04
transcriptional regulator
cg1_0.2_scaffold_782_c_30
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29525..30721
DNA (1197bp) protein (399aa)
Secretion protein HlyD n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SC7_RHOFD rbh
secretion protein HlyD Tax=CG_Rhodof_04
secretion protein HlyD
Displaying items 1-30 of 35 in total

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