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cg1_0.2_scaffold_1052_c

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_1052_c_1
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

197..1672
DNA (1476bp) protein (492aa)
ribonuclease; K08301 ribonuclease G [EC:3.1.26.-] Tax=CG_Rhodof_04
Ribonuclease G n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y666_9BURK rbh
ribonuclease
cg1_0.2_scaffold_1052_c_2
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1685..2434
DNA (750bp) protein (250aa)
Polysaccharide deacetylase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WP4_RHOFD rbh
polysaccharide deacetylase Tax=CG_Rhodof_04
polysaccharide deacetylase
cg1_0.2_scaffold_1052_c_3
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2509..3678
DNA (1170bp) protein (390aa)
group 1 glycosyl transferase; K02844 UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] Tax=CG_Rhodof_04
Glycosyl transferase, group 1 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WP3_RHOFD rbh
group 1 glycosyl transferase
cg1_0.2_scaffold_1052_c_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3734..4561
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0LYT3_GRAFK rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1052_c_5
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4620..6368)
DNA (1749bp) protein (583aa)
msbA2; lipid A export permease/ATP-binding protein MsbA (EC:3.6.3.-) Tax=CG_Rhodof_04
msbA2; lipid A export permease/ATP-binding protein MsbA (EC:3.6.3.-)
Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Variovorax sp. CF313 RepID=J3CVV7_9BURK rbh
cg1_0.2_scaffold_1052_c_6
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6407..7678)
DNA (1272bp) protein (424aa)
O-antigen polymerase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VNY4_POLNA rbh
O-antigen polymerase Tax=CG_Rhodof_04
O-antigen polymerase
cg1_0.2_scaffold_1052_c_7
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7821..8576
DNA (756bp) protein (252aa)
Cell wall biogenesis glycosyltransferase n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N8N4_9BURK rbh
cell wall biogenesis glycosyltransferase Tax=CG_Rhodof_04
cell wall biogenesis glycosyltransferase
cg1_0.2_scaffold_1052_c_8
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8587..9666
DNA (1080bp) protein (360aa)
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1052_c_9
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9724..11019
DNA (1296bp) protein (432aa)
Protein TolB n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=TOLB_RHOFD rbh
tolB; translocation protein TolB; K03641 TolB protein Tax=CG_Rhodof_04
tolB; translocation protein TolB
cg1_0.2_scaffold_1052_c_10
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11043..11573
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DMK2_9BACT rbh
OmpA/MotB; K03640 peptidoglycan-associated lipoprotein Tax=CG_Rhodof_04
OmpA/MotB
cg1_0.2_scaffold_1052_c_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11570..12379
DNA (810bp) protein (270aa)
Tetratricopeptide TPR_2 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WN5_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1052_c_12
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12407..13171
DNA (765bp) protein (255aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WN4_RHOFD rbh
UBA/THIF-type NAD/FAD-binding protein Tax=CG_Rhodof_04
UBA/THIF-type NAD/FAD-binding protein
cg1_0.2_scaffold_1052_c_13
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13592..15325)
DNA (1734bp) protein (578aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SE1_RHOFD rbh
methyl-accepting chemotaxis sensory transducer; K05874 methyl-accepting chemotaxis protein I, serine sensor receptor Tax=CG_Rhodof_04
methyl-accepting chemotaxis sensory transducer
cg1_0.2_scaffold_1052_c_14
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15694..16176)
DNA (483bp) protein (161aa)
rhodanese-like protein Tax=CG_Rhodof_04
rhodanese-like protein
cg1_0.2_scaffold_1052_c_15
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16318..18468)
DNA (2151bp) protein (717aa)
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=CG_Rhodof_04
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Polaromonas sp. CF318 RepID=J2KWF2_9BURK rbh
cg1_0.2_scaffold_1052_c_16
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18580..19899)
DNA (1320bp) protein (440aa)
Patatin protein n=1 Tax=uncultured organism RepID=D8VMM7_9ZZZZ rbh
patatin; K07001 NTE family protein Tax=CG_Rhodof_04
patatin
cg1_0.2_scaffold_1052_c_17
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20039..21130
DNA (1092bp) protein (364aa)
Putative iron sulfur binding protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TC2_RHOFD rbh
putative iron sulfur-binding protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=CG_Rhodof_04
putative iron sulfur-binding protein
cg1_0.2_scaffold_1052_c_18
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21108..22562)
DNA (1455bp) protein (485aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=CG_Rhodof_04
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III, epsilon subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VB4_RHOFD rbh
cg1_0.2_scaffold_1052_c_19
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22622..22750)
DNA (129bp) protein (43aa)
Tax=CG_Rhodof_04
cg1_0.2_scaffold_1052_c_20
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22722..23267)
DNA (546bp) protein (182aa)
NUDIX hydrolase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VB5_RHOFD rbh
NUDIX hydrolase Tax=CG_Rhodof_04
NUDIX hydrolase
cg1_0.2_scaffold_1052_c_21
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23298..23996)
DNA (699bp) protein (233aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VB9_RHOFD rbh
fumarylacetoacetate (FAA) hydrolase Tax=CG_Rhodof_04
fumarylacetoacetate (FAA) hydrolase
cg1_0.2_scaffold_1052_c_22
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24033..24335)
DNA (303bp) protein (101aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VC0_RHOFD rbh
antibiotic biosynthesis monooxygenase; K07145 Tax=CG_Rhodof_04
antibiotic biosynthesis monooxygenase
cg1_0.2_scaffold_1052_c_23
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24451..25437)
DNA (987bp) protein (329aa)
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] Tax=CG_Rhodof_04
Pseudouridine synthase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21X82_RHOFD rbh
pseudouridine synthase
cg1_0.2_scaffold_1052_c_24
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25508..26092)
DNA (585bp) protein (195aa)
hypothetical protein; K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] Tax=CG_Rhodof_04
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=TRMB_RHOFD rbh
hypothetical protein
cg1_0.2_scaffold_1052_c_25
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26342..27508
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UR8_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_04
hypothetical protein
cg1_0.2_scaffold_1052_c_26
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27509..27835
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YFU4_9BURK rbh
Putative uncharacterized protein Tax=CG_Rhodof_04
cg1_0.2_scaffold_1052_c_27
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27819..28232
DNA (414bp) protein (138aa)
Tax=CG_Rhodof_04
cg1_0.2_scaffold_1052_c_28
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28361..29416
DNA (1056bp) protein (352aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=CG_Rhodof_04
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VR6_RHOFD
Displaying 28 items

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