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cg1_0.2_scaffold_3723_c

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_3723_c_1
GWF2_OD1_38_8, Parcubacteria, Bacteria

Not on your lists

comp(3..188)
DNA (186bp) protein (62aa)
seg id=5227013 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tax=GWF2_OD1_38_8
cg1_0.2_scaffold_3723_c_2
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(315..1997)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z5D5_9BACT rbh
Uncharacterized protein Tax=CG_Nomura_03
cg1_0.2_scaffold_3723_c_3
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1954..2574)
DNA (621bp) protein (207aa)
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=CG_Nomura_03
Protein GrpE id=5227094 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
GrpE protein HSP-70 cofactor
cg1_0.2_scaffold_3723_c_4
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(2742..3167)
DNA (426bp) protein (142aa)
30S ribosomal protein S9 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035CD22E rbh
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=CG_Nomura_03
rpsI; 30S ribosomal protein S9
cg1_0.2_scaffold_3723_c_5
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(3173..3538)
DNA (366bp) protein (122aa)
50S ribosomal protein L13 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVZ5_9BACT rbh
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=CG_Nomura_03
50S ribosomal protein L13
cg1_0.2_scaffold_3723_c_6
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(3580..3933)
DNA (354bp) protein (118aa)
50S ribosomal protein L17 n=1 Tax=sediment metagenome RepID=D9PK61_9ZZZZ rbh
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=CG_Nomura_03
rplQ; 50S ribosomal protein L17
cg1_0.2_scaffold_3723_c_7
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(3980..4972)
DNA (993bp) protein (331aa)
rpoA; putative DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=CG_Nomura_03
rpoA; putative DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha id=5227098 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
cg1_0.2_scaffold_3723_c_8
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(5067..5672)
DNA (606bp) protein (202aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=CG_Nomura_03
30S ribosomal protein S4 id=5227099 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
30S ribosomal protein S4
cg1_0.2_scaffold_3723_c_9
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(5719..6162)
DNA (444bp) protein (148aa)
Ribosomal protein S11 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q017_9BACT rbh
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=CG_Nomura_03
30S ribosomal protein S11
cg1_0.2_scaffold_3723_c_10
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(6200..6580)
DNA (381bp) protein (127aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=CG_Nomura_03
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 id=5803405 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
30S ribosomal protein S13
cg1_0.2_scaffold_3723_c_11
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(6808..7041)
DNA (234bp) protein (78aa)
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=CG_Nomura_03
Translation initiation factor IF-1 id=5227103 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
infA; translation initiation factor IF-1
cg1_0.2_scaffold_3723_c_12
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7117..8406)
DNA (1290bp) protein (430aa)
seg Tax=CG_Nomura_03
seg id=5803403 bin=OD1_GWC2_34_28 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
cg1_0.2_scaffold_3723_c_13
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(8416..9591)
DNA (1176bp) protein (392aa)
id=5803402 Tax=CG_Nomura_03
id=5803402 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
cg1_0.2_scaffold_3723_c_14
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(9626..11281)
DNA (1656bp) protein (552aa)
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=CG_Nomura_03
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW05_9BACT rbh
Alanine-tRNA ligase
cg1_0.2_scaffold_3723_c_15
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11305..11778)
DNA (474bp) protein (158aa)
MgtC/SapB family transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein Tax=CG_Nomura_03
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein id=5227107 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
MgtC/SapB family transporter
cg1_0.2_scaffold_3723_c_16
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11912..13141)
DNA (1230bp) protein (410aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=CG_Nomura_03
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA id=5227109 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
cg1_0.2_scaffold_3723_c_17
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(13254..13781)
DNA (528bp) protein (176aa)
exonuclease; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=CG_Nomura_03
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000368DA70 rbh
exonuclease
cg1_0.2_scaffold_3723_c_18
CG_Nomura_03, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(13903..14790)
DNA (888bp) protein (296aa)
hypothetical protein Tax=CG_Nomura_03
Aminodeoxychorismate lyase id=5227111 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) rbh
hypothetical protein
Displaying 18 items

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