ggKbase home page

cg1_0.2_scaffold_3529_c

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_3529_c_1
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3..1898)
-----------------
DNA (1896bp)
protein (632aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B485AC rbh
fibronectin type III domain-containing protein Tax=CG_Magasa_01
hypothetical protein
cg1_0.2_scaffold_3529_c_2
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2068..2928)
-----------------
DNA (861bp)
protein (287aa)
transmembrane_regions 66..88 Tax=CG_Magasa_01
transmembrane_regions 66..88 id=13523 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1 rbh
cg1_0.2_scaffold_3529_c_3
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

3813..5546
-----------------
DNA (1734bp)
protein (578aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EM27_9BACT rbh
Type II secretion system protein E Tax=CG_Magasa_01
secretion system protein E
cg1_0.2_scaffold_3529_c_4
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

5594..6715
-----------------
DNA (1122bp)
protein (374aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YK03_9BACT rbh
pilC; general protein secretion protein; K02653 type IV pilus assembly protein PilC Tax=CG_Magasa_01
type II secretion system protein F
cg1_0.2_scaffold_3529_c_5
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

6757..7863
-----------------
DNA (1107bp)
protein (369aa)
fimbrial assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=CG_Magasa_01
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM id=13194 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1 rbh
fimbrial assembly protein PilM
cg1_0.2_scaffold_3529_c_6
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

7866..8393
-----------------
DNA (528bp)
protein (176aa)
seg 29..47 Tax=CG_Magasa_01
seg 29..47 id=13192 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1 rbh
cg1_0.2_scaffold_3529_c_7
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

8395..8916
-----------------
DNA (522bp)
protein (174aa)
coiled-coil 36..57 Tax=CG_Magasa_01
coiled-coil 36..57 id=13196 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1 rbh
cg1_0.2_scaffold_3529_c_8
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

8919..9323
-----------------
DNA (405bp)
protein (135aa)
seg 21..46 Tax=CG_Magasa_01
seg 21..46 id=13191 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1 rbh
cg1_0.2_scaffold_3529_c_9
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

9393..10517
-----------------
DNA (1125bp)
protein (375aa)
DNA methylase Tax=CG_Magasa_01
RNA methylase, putative id=13193 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1 rbh
hypothetical protein
cg1_0.2_scaffold_3529_c_10
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11078..11470)
-----------------
DNA (393bp)
protein (131aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F885_9BACT rbh
hypothetical protein Tax=CG_Magasa_01
hypothetical protein
cg1_0.2_scaffold_3529_c_11
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11604..11999)
-----------------
DNA (396bp)
protein (132aa)
MutT/nudix family phosphohydrolase n=1 Tax=uncultured bacterium RepID=K2DM29_9BACT rbh
NUDIX hydrolase Tax=CG_Magasa_01
NUDIX hydrolase
cg1_0.2_scaffold_3529_c_12
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12083..13168)
-----------------
DNA (1086bp)
protein (362aa)
GTPase translation factor; K06942 Tax=CG_Magasa_01
gmc:GY4MC1_3825 GTP-binding protein YchF; K06942 id=13780 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1 rbh
GTP-binding protein
cg1_0.2_scaffold_3529_c_13
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(13256..14194)
-----------------
DNA (939bp)
protein (313aa)
hypothetical protein Tax=CG_Magasa_01
seg 170..182 id=13920 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1 rbh
hypothetical protein
cg1_0.2_scaffold_3529_c_14
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

14832..14960
-----------------
DNA (129bp)
protein (43aa)
Tax=CG_Magasa_01
cg1_0.2_scaffold_3529_c_15
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

15468..15860
-----------------
DNA (393bp)
protein (131aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z2K2_9BACT rbh
C4-type zinc finger protein, DksA/TraR family Tax=CG_Magasa_01
conjugal transfer protein TraR
cg1_0.2_scaffold_3529_c_16
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

15877..16308
-----------------
DNA (432bp)
protein (144aa)
lspA; lipoprotein signal peptidase II (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36] Tax=CG_Magasa_01
lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36] id=14251 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1 rbh
lspA; lipoprotein signal peptidase II (EC:3.4.23.36)
cg1_0.2_scaffold_3529_c_17
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

16330..17853
-----------------
DNA (1524bp)
protein (508aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F8L2_9BACT rbh
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein Tax=CG_Magasa_01
Mg chelatase subunit ChlI
cg1_0.2_scaffold_3529_c_trna_4
unknown

Not on your lists

comp(17895..17978)
-----------------
DNA (84bp)
transferRNA
cg1_0.2_scaffold_3529_c_18
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(19176..19436)
-----------------
DNA (261bp)
protein (87aa)
putative endonuclease containing a URI domain Tax=CG_Magasa_01
putative endonuclease containing a URI domain
cg1_0.2_scaffold_3529_c_trna_3
unknown

Not on your lists

comp(19439..19512)
-----------------
DNA (74bp)
transferRNA
cg1_0.2_scaffold_3529_c_trna_2
unknown

Not on your lists

comp(19674..19745)
-----------------
DNA (72bp)
transferRNA
cg1_0.2_scaffold_3529_c_trna_1
unknown

Not on your lists

comp(19854..19926)
-----------------
DNA (73bp)
transferRNA
cg1_0.2_scaffold_3529_c_19
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(20082..21716)
-----------------
DNA (1635bp)
protein (545aa)
sodium/hydrogen exchanger Tax=CG_Magasa_01
sodium/hydrogen exchanger id=13505 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1 rbh
Transporter, CPA2 family
cg1_0.2_scaffold_3529_c_20
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(21957..25724)
-----------------
DNA (3768bp)
protein (1256aa)
OB-fold tRNA/helicase-type nucleic acid binding-protein Tax=CG_Magasa_01
nucleic acid binding OB-fold tRNA/helicase-type id=13506 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1 rbh
OB-fold tRNA/helicase-type nucleic acid binding-protein
Displaying 24 items

View Taxonomy