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cg1_0.2_scaffold_501_c

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Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_501_c_1
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(440..766)
DNA (327bp) protein (109aa)
hypothetical protein Tax=CG_CPR04_01
hypothetical protein
cg1_0.2_scaffold_501_c_2
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists


comp(1050..1529)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036D38F0 rbh
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=CG_CPR04_01
rpsP; 30S ribosomal protein S16
cg1_0.2_scaffold_501_c_3
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(1644..2342)
DNA (699bp) protein (233aa)
putative ribonuclease III (EC:3.1.26.3) Tax=CG_CPR04_01
hypothetical protein
cg1_0.2_scaffold_501_c_4
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(2488..2925)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037383A0 rbh
putative transcription termination factor Tax=CG_CPR04_01
putative transcription termination factor
cg1_0.2_scaffold_501_c_5
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(3015..3293)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035F3F5F rbh
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=CG_CPR04_01
rpmF; 50S ribosomal protein L32
cg1_0.2_scaffold_501_c_6
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(3539..3844)
DNA (306bp) protein (102aa)
Tax=CG_CPR04_01
cg1_0.2_scaffold_501_c_7
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(3910..4608)
DNA (699bp) protein (233aa)
ribonuclease HII (EC:3.1.26.4) Tax=CG_CPR04_01
ribonuclease HII (EC:3.1.26.4)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000378DBB9 rbh
cg1_0.2_scaffold_501_c_8
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

4609..5283
DNA (675bp) protein (225aa)
id=3355434 Tax=CG_CPR04_01
cg1_0.2_scaffold_501_c_9
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

5362..8565
DNA (3204bp) protein (1068aa)
dnaE; DNA polymerase III DnaE (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=CG_CPR04_01
dnaE; DNA polymerase III DnaE (EC:2.7.7.7)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000381959E rbh
cg1_0.2_scaffold_501_c_10
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(8861..9148)
DNA (288bp) protein (96aa)
Tax=CG_CPR04_01
cg1_0.2_scaffold_501_c_11
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

9236..11005
DNA (1770bp) protein (590aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=CG_CPR04_01
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036DA2A5 rbh
cg1_0.2_scaffold_501_c_12
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

11136..12230
DNA (1095bp) protein (365aa)
miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC:2.-.-.-)
MiaB family RNA modification protein; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA Tax=CG_CPR04_01
cg1_0.2_scaffold_501_c_13
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

12290..12652
DNA (363bp) protein (121aa)
Radical SAM enzymes Tax=CG_CPR04_01
Radical SAM enzymes id=2597 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i rbh
cg1_0.2_scaffold_501_c_14
RBG_13_RIF_OD1_08_41_18_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

12679..13413
DNA (735bp) protein (245aa)
Radical SAM enzymes Tax=RBG_13_RIF_OD1_08_41_18_curated
cg1_0.2_scaffold_501_c_15
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

13514..13765
DNA (252bp) protein (84aa)
Tax=CG_CPR04_01
cg1_0.2_scaffold_501_c_16
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

13814..14854
DNA (1041bp) protein (347aa)
tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=CG_CPR04_01
tRNA delta(2)-isopentenylpyrophosphate transferase
cg1_0.2_scaffold_501_c_17
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(14894..15316)
DNA (423bp) protein (141aa)
Tax=CG_CPR04_01
cg1_0.2_scaffold_501_c_18
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(15353..16813)
DNA (1461bp) protein (487aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=CG_CPR04_01
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=uncultured bacterium RepID=K2F1M4_9BACT rbh
cg1_0.2_scaffold_501_c_19
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(17065..17922)
DNA (858bp) protein (286aa)
folD; methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5 3.5.4.9) Tax=CG_CPR04_01
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] id=9237 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i rbh
Methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
cg1_0.2_scaffold_501_c_20
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(18043..19272)
DNA (1230bp) protein (410aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=CG_CPR04_01
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FH89_9FIRM rbh
cg1_0.2_scaffold_501_c_21
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(19282..19821)
DNA (540bp) protein (180aa)
dcd2; deoxycytidine deaminase Tax=CG_CPR04_01
dcd2; deoxycytidine deaminase
cg1_0.2_scaffold_501_c_22
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(19908..20249)
DNA (342bp) protein (114aa)
Tax=CG_CPR04_01
cg1_0.2_scaffold_501_c_23
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(20266..20949)
DNA (684bp) protein (228aa)
thymidylate synthase; K00560 thymidylate synthase [EC:2.1.1.45] Tax=CG_CPR04_01
Thymidylate synthase n=2 Tax=Dehalococcoides mccartyi RepID=D2BHQ5_DEHSV rbh
thyA; thymidylate synthase
cg1_0.2_scaffold_501_c_24
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(20946..21434)
DNA (489bp) protein (163aa)
cytidine and deoxycytidylate deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=CG_CPR04_01
Cytidine and deoxycytidylate deaminase zinc-binding region family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D5E9_CLODI rbh
cytidine and deoxycytidylate deaminase
cg1_0.2_scaffold_501_c_25
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(21564..22247)
DNA (684bp) protein (228aa)
Putative domain HDIG domain-containing protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MT85_9CLOT rbh
putative domain HDIG domain-containing protein Tax=CG_CPR04_01
putative domain HDIG domain-containing protein
cg1_0.2_scaffold_501_c_26
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists


comp(22397..22819)
DNA (423bp) protein (141aa)
50S ribosomal protein L11 n=1 Tax=uncultured bacterium RepID=K2EZQ6_9BACT rbh
50S ribosomal protein L11 Tax=CG_CPR04_01
rplK; 50S ribosomal protein L11
cg1_0.2_scaffold_501_c_27
GWB1_OD1_42_6, Parcubacteria, Bacteria

Not on your lists

comp(23008..23208)
DNA (201bp) protein (67aa)
S23 ribosomal protein {ECO:0000313|EMBL:KKS65294.1}; TaxID=1618870 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_42_6.;"
S23 ribosomal protein
cg1_0.2_scaffold_501_c_28
CG_CPR04_01, CG_CPR04, Bacteria

Not on your lists

comp(23294..23836)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000366B9C3 rbh
nusG; transcription antitermination factor Tax=CG_CPR04_01
nusG; transcription antitermination factor
cg1_0.2_scaffold_501_c_29
RBG_13_RIF_OD1_08_40_8_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(23928..24119)
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000368D926 rbh
preprotein translocase, SecE subunit Tax=RBG_13_RIF_OD1_08_40_8_curated
cg1_0.2_scaffold_501_c_30
unknown

Not on your lists

comp(24159..24350)
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying items 1-30 of 46 in total

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