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cg1_0.2_scaffold_1866_c

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_1866_c_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..261
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI000369B045
Transposase IS4 family protein {ECO:0000313|EMBL:EIJ34239.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea D
transposase IS4 family protein
cg1_0.2_scaffold_1866_c_2
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

270..482
DNA (213bp) protein (71aa)
GGDEF domain-containing protein n=1 Tax=Vibrio fischeri SR5 RepID=H1R4Y4_ALIFS
sensory box/ggdef family protein Tax=CG_Mariprof_03
putative membrane associated regulator, GGDEF family protein
cg1_0.2_scaffold_1866_c_3
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

525..953
DNA (429bp) protein (143aa)
Tax=CG_Mariprof_03
cg1_0.2_scaffold_1866_c_4
Mariprofundus ferrooxydans, Mariprofundus, Mariprofundales, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

953..1222
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00037A7C97
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EAU54857.1}; TaxID=314345 species="Bacteria; Proteobacteria; Zetaproteobacteria; Mariprofundales; Mariprofundaceae; Mariprofundus.;" source="Mari
PAS domain-containing protein
cg1_0.2_scaffold_1866_c_5
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1281..1565
DNA (285bp) protein (95aa)
Histidine kinase (EC:2.7.13.3) Tax=CG_Mariprof_03
Histidine kinase (EC:2.7.13.3)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00035D9C6E
cg1_0.2_scaffold_1866_c_6
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1559..1861
DNA (303bp) protein (101aa)
Tax=CG_Mariprof_03
cg1_0.2_scaffold_1866_c_7
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1858..2130
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00035C5625
PAS domain-containing protein Tax=CG_Mariprof_03
PAS domain-containing protein
cg1_0.2_scaffold_1866_c_8
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2204..2812
DNA (609bp) protein (203aa)
inorganic diphosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1] Tax=CG_Mariprof_03
inorganic diphosphatase (EC:3.6.1.1)
inorganic pyrophosphatase n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00037C552F rbh
cg1_0.2_scaffold_1866_c_9
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2878..3519)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI0003703FED rbh
Chalcone-flavanone isomerase Tax=CG_Mariprof_03
Chalcone-flavanone isomerase
cg1_0.2_scaffold_1866_c_10
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3600..6266
DNA (2667bp) protein (889aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZT7_9PROT rbh
two component system hybrid sensor protein Tax=CG_Mariprof_03
two component system hybrid sensor protein
cg1_0.2_scaffold_1866_c_11
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6297..7370)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZT8_9PROT rbh
hypothetical protein; K09151 hypothetical protein Tax=CG_Mariprof_03
hypothetical protein
cg1_0.2_scaffold_1866_c_12
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7358..8503)
DNA (1146bp) protein (382aa)
hypothetical protein; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] Tax=CG_Mariprof_03
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZT9_9PROT rbh
hypothetical protein
cg1_0.2_scaffold_1866_c_13
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8563..9219)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI0003717EFF rbh
antenna complex subunit alpha/beta; K08930 light-harvesting protein B-800-850 alpha chain Tax=CG_Mariprof_03
antenna complex subunit alpha/beta
cg1_0.2_scaffold_1866_c_14
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9810..10994
DNA (1185bp) protein (395aa)
tyrS; tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] Tax=CG_Mariprof_03
Tyrosine--tRNA ligase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZU1_9PROT rbh
tyrS; tyrosyl-tRNA ligase
cg1_0.2_scaffold_1866_c_15
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11051..12523
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000362A1DC rbh
peptidase M48 Ste24p Tax=CG_Mariprof_03
peptidase M48 Ste24p
cg1_0.2_scaffold_1866_c_16
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12608..12910)
DNA (303bp) protein (101aa)
Tax=CG_Mariprof_03
cg1_0.2_scaffold_1866_c_17
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13136..14395
DNA (1260bp) protein (420aa)
Response regulator containing a CheY-like receiver domain and a GGDEF domain n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F106_9PROT rbh
diguanylate cyclase with PAS/PAC sensor Tax=CG_Mariprof_03
diguanylate cyclase with PAS/PAC sensor
cg1_0.2_scaffold_1866_c_18
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14477..14686
DNA (210bp) protein (70aa)
Tax=CG_Mariprof_03
cg1_0.2_scaffold_1866_c_19
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14700..14876)
DNA (177bp) protein (59aa)
N-carbamoyl-L-amino acid amidohydrolase n=2 Tax=Mariprofundus RepID=Q0F1Y5_9PROT rbh
N-carbamoyl-L-amino acid amidohydrolase Tax=CG_Mariprof_03
cg1_0.2_scaffold_1866_c_trna_2
unknown

Not on your lists

comp(15076..15159)
DNA (84bp)
transferRNA
cg1_0.2_scaffold_1866_c_20
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15219..17375)
DNA (2157bp) protein (719aa)
lidP; exoribonuclease R (EC:3.1.-.-); K12573 ribonuclease R [EC:3.1.-.-] Tax=CG_Mariprof_03
lidP; exoribonuclease R (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWH9_9PROT rbh
cg1_0.2_scaffold_1866_c_trna_1
unknown

Not on your lists

17436..17519
DNA (84bp)
transferRNA
cg1_0.2_scaffold_1866_c_21
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18055..18960
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00037DEC71 rbh
xerD; integrase/recombinase XerD; K04763 integrase/recombinase XerD Tax=CG_Mariprof_03
xerD; integrase/recombinase XerD
cg1_0.2_scaffold_1866_c_22
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19044..20213
DNA (1170bp) protein (390aa)
citrate synthase (EC:2.3.3.1) Tax=CG_Mariprof_03
citrate synthase (EC:2.3.3.1)
citrate synthase n=1 Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI0003699AB1 rbh
cg1_0.2_scaffold_1866_c_23
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20210..20692)
DNA (483bp) protein (161aa)
Multi-sensor Hybrid Histidine Kinase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3T4_9PROT
two-component sensor histidine kinase Tax=CG_Mariprof_03
two-component sensor histidine kinase
cg1_0.2_scaffold_1866_c_24
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20673..21845)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00035C5625
PAS/PAC sensor hybrid histidine kinase Tax=CG_Mariprof_03
PAS/PAC sensor hybrid histidine kinase
cg1_0.2_scaffold_1866_c_25
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21876..22133)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI0003742EC9
Transposase IS4 family protein {ECO:0000313|EMBL:EIJ34239.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea D
transposase IS4 family protein
Displaying 27 items

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