ggKbase home page

cg1_0.2_scaffold_6326_c

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_6326_c_1
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..201)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-602-C20 RepID=UPI0003682B2D rbh
Uncharacterized protein {ECO:0000313|EMBL:KHF24994.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
transposase
cg1_0.2_scaffold_6326_c_2
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

544..1584
DNA (1041bp) protein (347aa)
membrane-bound lytic transglycosylase; K08305 membrane-bound lytic murein transglycosylase B [EC:3.2.1.-] Tax=CG_Mariprof_03
Membrane-bound lytic transglycosylase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2T9_9PROT rbh
membrane-bound lytic transglycosylase
cg1_0.2_scaffold_6326_c_3
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1770..2429
DNA (660bp) protein (220aa)
Lipoprotein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2T8_9PROT rbh
lipoprotein; K03642 rare lipoprotein A Tax=CG_Mariprof_03
lipoprotein
cg1_0.2_scaffold_6326_c_4
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2429..2971
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI000377203F rbh
putative lysine decarboxylase; K06966 Tax=CG_Mariprof_03
putative lysine decarboxylase
cg1_0.2_scaffold_6326_c_5
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2968..3837
DNA (870bp) protein (290aa)
RluA family pseudouridine synthase (EC:3.2.1.17) Tax=CG_Mariprof_03
Pseudouridine synthase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F2T6_9PROT rbh
RluA family pseudouridine synthase
cg1_0.2_scaffold_6326_c_6
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3831..5057
DNA (1227bp) protein (409aa)
dacC; penicillin-binding protein (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] Tax=CG_Mariprof_03
dacC; penicillin-binding protein (EC:3.4.16.4)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI000379DCAB rbh
cg1_0.2_scaffold_6326_c_7
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5063..5917
DNA (855bp) protein (285aa)
D-alanine aminotransferase (EC:2.6.1.21); K00824 D-alanine transaminase [EC:2.6.1.21] Tax=CG_Mariprof_03
D-alanine aminotransferase (EC:2.6.1.21)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00036E88F3 rbh
cg1_0.2_scaffold_6326_c_8
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5910..6551
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00036BEC45 rbh
2-phosphoglycolate phosphatase Tax=CG_Mariprof_03
2-phosphoglycolate phosphatase
cg1_0.2_scaffold_6326_c_9
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6530..7384
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI000377EFA4 rbh
hslO; Hsp33-like chaperonin; K04083 molecular chaperone Hsp33 Tax=CG_Mariprof_03
hslO; Hsp33-like chaperonin
cg1_0.2_scaffold_6326_c_10
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7398..8078
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EY75_9PROT rbh
hypothetical protein; K07043 Tax=CG_Mariprof_03
hypothetical protein
cg1_0.2_scaffold_6326_c_11
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8232..8549
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Mariprofundus RepID=Q0F306_9PROT rbh
Uncharacterized protein Tax=CG_Mariprof_03
cg1_0.2_scaffold_6326_c_12
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8704..9390)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F308_9PROT rbh
hypothetical protein Tax=CG_Mariprof_03
conserved hypothetical protein
cg1_0.2_scaffold_6326_c_13
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9485..10159
DNA (675bp) protein (225aa)
spermidine synthase n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00037C2EE3 rbh
spermine synthase Tax=CG_Mariprof_03
spermine synthase
cg1_0.2_scaffold_6326_c_14
unknown

Not on your lists

10206..10394
DNA (189bp) protein (63aa)

This feature has no annotations

cg1_0.2_scaffold_6326_c_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10600..10767
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI00036E835B
integrase catalytic subunit
Uncharacterized protein {ECO:0000313|EMBL:EKS29273.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
Displaying 15 items

View Taxonomy