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cg1_0.2_scaffold_262_c

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_262_c_1
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(354..1385)
DNA (1032bp) protein (344aa)
galE; UDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=CG_Woesearch_03
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002D9A82D rbh
cg1_0.2_scaffold_262_c_2
CG_Woesearch_03, Woesearchaeota, Archaea

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1571..3442
DNA (1872bp) protein (624aa)
Kef-type potassium/proton antiporter, CPA2 family n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I5C0_METCZ rbh
Kef-type potassium/proton antiporter; K03455 monovalent cation:H+ antiporter-2, CPA2 family Tax=CG_Woesearch_03
Kef-type potassium/proton antiporter
cg1_0.2_scaffold_262_c_trna_1
unknown

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3693..3824
DNA (132bp)
transferRNA
cg1_0.2_scaffold_262_c_trna_2
unknown

Not on your lists

3961..4044
DNA (84bp)
transferRNA
cg1_0.2_scaffold_262_c_3
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

4393..5481
DNA (1089bp) protein (363aa)
Tax=CG_Woesearch_03
cg1_0.2_scaffold_262_c_4
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(5583..7073)
DNA (1491bp) protein (497aa)
Tax=CG_Woesearch_03
cg1_0.2_scaffold_262_c_5
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(7248..7847)
DNA (600bp) protein (200aa)
Tax=CG_Woesearch_03
cg1_0.2_scaffold_262_c_6
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(7847..8209)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036B5428 rbh
response regulator receiver sensor signal transduction histidine kinase Tax=CG_Woesearch_03
two component transcriptional regulator, winged helix family
cg1_0.2_scaffold_262_c_7
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(8209..9027)
DNA (819bp) protein (273aa)
histidine kinase (EC:2.7.13.3) Tax=CG_Woesearch_03
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JII7_9ARCH rbh
histidine kinase
cg1_0.2_scaffold_262_c_8
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(9024..9959)
DNA (936bp) protein (312aa)
von Willebrand factor type A; K07114 uncharacterized protein Tax=CG_Woesearch_03
von Willebrand factor type A protein
cg1_0.2_scaffold_262_c_9
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(9959..10843)
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Flavobacteria bacterium MS024-3C RepID=C0BLN5_9BACT id=5103596 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome rbh
hypothetical protein Tax=CG_Woesearch_03
hypothetical protein
cg1_0.2_scaffold_262_c_10
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(10840..11895)
DNA (1056bp) protein (352aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=CG_Woesearch_03
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003787256 rbh
ATPase
cg1_0.2_scaffold_262_c_11
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

12030..12401
DNA (372bp) protein (124aa)
Tax=CG_Woesearch_03
cg1_0.2_scaffold_262_c_12
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(12372..16814)
DNA (4443bp) protein (1481aa)
outer membrane protein Tax=CG_Woesearch_03
outer membrane protein
cg1_0.2_scaffold_262_c_13
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(16811..19528)
DNA (2718bp) protein (906aa)
gigantic extracellular protein with interesting sushi (9x) and archaeal protease type repeats having the domain architecture: signal peptide-CRYPB(3x)-sushi (9x)-archaeoglobus type repeats (2x) Tax=CG
hypothetical protein
cg1_0.2_scaffold_262_c_14
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(19525..19701)
DNA (177bp) protein (59aa)
id=5044904 Tax=CG_Woesearch_03
cg1_0.2_scaffold_262_c_15
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

20001..20741
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAK5_METMS id=5103592 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome rbh
hypothetical protein; K06869 uncharacterized protein Tax=CG_Woesearch_03
hypothetical protein
cg1_0.2_scaffold_262_c_16
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

22251..22793
DNA (543bp) protein (181aa)
id=5047512 Tax=CG_Woesearch_03
cg1_0.2_scaffold_262_c_17
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(23222..23725)
DNA (504bp) protein (168aa)
Helix-turn-helix, type 11 Tax=CG_Woesearch_03
cg1_0.2_scaffold_262_c_18
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

23779..24429
DNA (651bp) protein (217aa)
Predicted DNA methylase n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JDP7_THEKO rbh
DNA methylase; K07579 putative methylase Tax=CG_Woesearch_03
DNA methylase
cg1_0.2_scaffold_262_c_19
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

24502..24777
DNA (276bp) protein (92aa)
DNA-directed RNA polymerase subunit L n=2 Tax=Methanobacterium RepID=K6SZJ9_9EURY id=5103326 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome rbh
DNA-directed RNA polymerase subunit L
DNA-directed RNA polymerase subunit L Tax=CG_Woesearch_03
cg1_0.2_scaffold_262_c_20
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

24911..25357
DNA (447bp) protein (149aa)
Transcriptional repressor NrdR n=1 Tax=Acidaminococcus sp. CAG:542 RepID=R7M3A3_9FIRM rbh
ATP-cone domain-containing protein; K07738 transcriptional repressor NrdR Tax=CG_Woesearch_03
ATP-cone domain-containing protein
cg1_0.2_scaffold_262_c_21
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

25425..25994
DNA (570bp) protein (190aa)
hypothetical protein Tax=CG_Woesearch_03
Uncharacterized protein id=5799723 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
hypothetical protein
cg1_0.2_scaffold_262_c_22
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

25999..26988
DNA (990bp) protein (330aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; K03778 D-lactate dehydrogenase [EC:1.1.1.28] Tax=CG_Woesearch_03
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAH7_SPHTD id=5223889 bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade rbh
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
cg1_0.2_scaffold_262_c_23
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

27116..29398
DNA (2283bp) protein (761aa)
acnA; aconitase; K01681 aconitate hydratase 1 [EC:4.2.1.3] Tax=CG_Woesearch_03
Aconitase A n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANL8_IGNAJ rbh
acnA; aconitase
cg1_0.2_scaffold_262_c_24
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

29444..30685
DNA (1242bp) protein (414aa)
isocitrate dehydrogenase (EC:1.1.1.42) Tax=CG_Woesearch_03
Isocitrate dehydrogenase [NADP] n=1 Tax=Bacillus israeli RepID=O06893_BACIS rbh
isocitrate dehydrogenase, NADP-dependent
cg1_0.2_scaffold_262_c_25
unknown

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30844..31017
DNA (174bp) protein (58aa)

This feature has no annotations

cg1_0.2_scaffold_262_c_26
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(30948..31568)
DNA (621bp) protein (207aa)
Uncharacterised UPF0005 family protein n=3 Tax=Brevibacillus laterosporus RepID=H0UFE2_BRELA rbh
ferric receptor CfrA; K06890 Tax=CG_Woesearch_03
yccA; modulator of FtsH protease YccA
cg1_0.2_scaffold_262_c_27
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists


32103..32747
DNA (645bp) protein (215aa)
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 Tax=CG_Woesearch_03
50S ribosomal protein L1
cg1_0.2_scaffold_262_c_28
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists


32744..33616
DNA (873bp) protein (291aa)
50S ribosomal protein L10 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVQ4_9EURY rbh
ribosomal protein L10 Tax=CG_Woesearch_03
ribosomal protein L10
Displaying items 1-30 of 58 in total

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