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cg1_0.2_scaffold_3534_c

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_3534_c_1
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

87..305
DNA (219bp) protein (73aa)
Tax=CG_Woesearch_01
cg1_0.2_scaffold_3534_c_2
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

286..1509
DNA (1224bp) protein (408aa)
IS66 family element, transposase n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z2R1_9EURY rbh
transposase IS66 family Tax=CG_Woesearch_01
transposase IS66 family
cg1_0.2_scaffold_3534_c_3
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(1688..2443)
DNA (756bp) protein (252aa)
Putative uncharacterized protein Tax=CG_Woesearch_01
hypothetical protein
cg1_0.2_scaffold_3534_c_4
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(2445..3842)
DNA (1398bp) protein (466aa)
Protein translocase subunit SecY n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TB98_METSL id=5103275 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome rbh
preprotein translocase secY-like subunit; K03076 preprotein translocase subunit SecY Tax=CG_Woesearch_01
Protein translocase subunit SecY
cg1_0.2_scaffold_3534_c_5
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(3893..4387)
DNA (495bp) protein (165aa)
ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=CG_Woesearch_01
ribosomal protein L15
cg1_0.2_scaffold_3534_c_6
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(4405..4836)
DNA (432bp) protein (144aa)
rpl30p; 50S ribosomal protein L30P; K02907 large subunit ribosomal protein L30 Tax=CG_Woesearch_01
50S ribosomal protein L30P id=5800042 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
rpl30p; 50S ribosomal protein L30P
cg1_0.2_scaffold_3534_c_7
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(4829..5695)
DNA (867bp) protein (289aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 Tax=CG_Woesearch_01
30S ribosomal protein S5
cg1_0.2_scaffold_3534_c_8
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(5688..6278)
DNA (591bp) protein (197aa)
50S ribosomal protein L18P n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXV1_FERPA rbh
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=CG_Woesearch_01
50S ribosomal protein L18
cg1_0.2_scaffold_3534_c_9
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(6275..6739)
DNA (465bp) protein (155aa)
50S ribosomal protein L19e n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RE48_ARCPA rbh
50S ribosomal protein L19e; K02885 large subunit ribosomal protein L19e Tax=CG_Woesearch_01
LSU ribosomal protein L19e
cg1_0.2_scaffold_3534_c_10
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(6782..7369)
DNA (588bp) protein (196aa)
50S ribosomal protein L32; K02912 large subunit ribosomal protein L32e Tax=CG_Woesearch_01
50S ribosomal protein L32
cg1_0.2_scaffold_3534_c_11
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(7374..7940)
DNA (567bp) protein (189aa)
50S ribosomal protein L6 Tax=CG_Woesearch_01
50S ribosomal protein L6
cg1_0.2_scaffold_3534_c_12
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(7942..8331)
DNA (390bp) protein (130aa)
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=CG_Woesearch_01
30S ribosomal protein S8
cg1_0.2_scaffold_3534_c_13
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(8341..8571)
DNA (231bp) protein (77aa)
hypothetical protein; K02954 small subunit ribosomal protein S14 Tax=CG_Woesearch_01
SSU ribosomal protein S14P
cg1_0.2_scaffold_3534_c_14
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(8568..9101)
DNA (534bp) protein (178aa)
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=CG_Woesearch_01
50S ribosomal protein L5
cg1_0.2_scaffold_3534_c_15
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(9120..9848)
DNA (729bp) protein (243aa)
30S ribosomal protein S4e n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RS4E_METJA rbh
30S ribosomal protein S4e; K02987 small subunit ribosomal protein S4e Tax=CG_Woesearch_01
30S ribosomal protein S4e
cg1_0.2_scaffold_3534_c_16
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(9854..10234)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372D201 rbh
LSU ribosomal protein l24p; K02895 large subunit ribosomal protein L24 Tax=CG_Woesearch_01
50S ribosomal protein L24
cg1_0.2_scaffold_3534_c_17
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(10276..10677)
DNA (402bp) protein (134aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=CG_Woesearch_01
50S ribosomal protein L14P
cg1_0.2_scaffold_3534_c_18
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(10695..11120)
DNA (426bp) protein (142aa)
30S ribosomal protein S17P n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VYH7_9EURY rbh
rps17p; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=CG_Woesearch_01
rps17p; 30S ribosomal protein S17
cg1_0.2_scaffold_3534_c_19
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(11117..11407)
DNA (291bp) protein (97aa)
ribonuclease P protein component 1; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] Tax=CG_Woesearch_01
Ribonuclease P protein component 1 n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2H7_9ARCH rbh
ribonuclease P protein component 1
cg1_0.2_scaffold_3534_c_20
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(11397..11705)
DNA (309bp) protein (103aa)
Protein translation factor SUI1 homolog n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZC6_METFV rbh
translation initiation factor 1 (eif-1/sui1); K03113 translation initiation factor 1 Tax=CG_Woesearch_01
translation initiation factor 1 (eif-1/sui1)
cg1_0.2_scaffold_3534_c_21
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(11702..11911)
DNA (210bp) protein (70aa)
Tax=CG_Woesearch_01
cg1_0.2_scaffold_3534_c_22
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(11908..12636)
DNA (729bp) protein (243aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GQK3_9ZZZZ rbh
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=CG_Woesearch_01
30S ribosomal protein S3
cg1_0.2_scaffold_3534_c_23
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(12633..13160)
DNA (528bp) protein (176aa)
ribosomal protein L22P Rpl22p Tax=CG_Woesearch_01
ribosomal protein L22P Rpl22p
cg1_0.2_scaffold_3534_c_24
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(13170..13550)
DNA (381bp) protein (127aa)
30S ribosomal protein S15e (S19p); K02965 small subunit ribosomal protein S19 Tax=CG_Woesearch_01
30S ribosomal protein S19 id=5800060 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
30S ribosomal protein S19P
cg1_0.2_scaffold_3534_c_25
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(13578..14309)
DNA (732bp) protein (244aa)
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=CG_Woesearch_01
rpl2p; 50S ribosomal protein L2P
cg1_0.2_scaffold_3534_c_26
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(14315..14566)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003624D48 rbh
50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=CG_Woesearch_01
50S ribosomal protein L23
cg1_0.2_scaffold_3534_c_27
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(14572..15405)
DNA (834bp) protein (278aa)
rpl4lp; 50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e Tax=CG_Woesearch_01
50S ribosomal protein L4
cg1_0.2_scaffold_3534_c_28
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(15415..16416)
DNA (1002bp) protein (334aa)
rpl3p; 50S ribosomal protein L3P; K02906 large subunit ribosomal protein L3 Tax=CG_Woesearch_01
rpl3p; 50S ribosomal protein L3P
cg1_0.2_scaffold_3534_c_29
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

16432..16554
DNA (123bp) protein (41aa)
Tax=CG_Woesearch_01
Displaying 29 items

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