ggKbase home page

cg1_0.2_scaffold_1458_c

Search features with annotation key words

Displaying 22 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_1458_c_1
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50..769)
DNA (720bp) protein (240aa)
Probable Ni/Fe-hydrogenase B-type cytochrome subunit n=1 Tax=Azotobacter chroococcum mcd 1 RepID=CYBH_AZOCH rbh
hoxZ; Ni/Fe-hydrogenase, b-type cytochrome subunit, HoxZ Tax=CG_Delta_03
hoxZ; Ni/Fe-hydrogenase, b-type cytochrome subunit, HoxZ
cg1_0.2_scaffold_1458_c_2
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(798..2591)
DNA (1794bp) protein (598aa)
hupL; ferredoxin hydrogenase large subunit; K06281 hydrogenase large subunit [EC:1.12.99.6] Tax=CG_Delta_03
Hydrogenase 2 large subunit n=1 Tax=uncultured bacterium ws138B4 RepID=I1X4Q4_9BACT
hupL; ferredoxin hydrogenase large subunit
cg1_0.2_scaffold_1458_c_3
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2593..3669)
DNA (1077bp) protein (359aa)
hupA; uptake hydrogenase small subunit HupA (EC:1.12.99.6); K06282 hydrogenase small subunit [EC:1.12.99.6] Tax=CG_Delta_03
hupA; uptake hydrogenase small subunit HupA (EC:1.12.99.6)
Uptake hydrogenase small subunit n=1 Tax=uncultured bacterium ws138B4 RepID=I1X4Q3_9BACT
cg1_0.2_scaffold_1458_c_4
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3888..4289
DNA (402bp) protein (134aa)
heat repeat domain protein Tax=CG_Delta_03
PBS lyase HEAT-like repeat id=4636471 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
heat repeat domain-containing protein
cg1_0.2_scaffold_1458_c_5
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4520..5515)
DNA (996bp) protein (332aa)
dihydroorotate dehydrogenase; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=CG_Delta_03
dihydroorotate oxidase; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] id=14631114 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
dihydroorotate dehydrogenase
cg1_0.2_scaffold_1458_c_6
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5818..7317)
DNA (1500bp) protein (500aa)
glycine dehydrogenase subunit beta (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] Tax=CG_Delta_03
glycine dehydrogenase subunit beta (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SL71_THEM7
cg1_0.2_scaffold_1458_c_7
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7317..8648)
DNA (1332bp) protein (444aa)
glycine dehydrogenase subunit alpha (EC:1.4.4.2); K00282 glycine dehydrogenase subunit 1 [EC:1.4.4.2] Tax=CG_Delta_03
glycine dehydrogenase subunit alpha (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PLR3_9FIRM
cg1_0.2_scaffold_1458_c_8
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8946..9599
DNA (654bp) protein (218aa)
Tax=CG_Delta_03
cg1_0.2_scaffold_1458_c_9
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9932..10282
DNA (351bp) protein (117aa)
NADH dehydrogenase, subunit A; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] Tax=CG_Delta_03
NADH-quinone oxidoreductase subunit A id=2999370 bin=GWA2_OP3_52_12 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
NADH dehydrogenase subunit A
cg1_0.2_scaffold_1458_c_10
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10287..10781
DNA (495bp) protein (165aa)
nuoB1_[H]; NADH-ubiquinone oxidoreductase chain B (EC:1.6.5.3) Tax=CG_Delta_03
NADH dehydrogenase subunit B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B id=4828150 bin=GWC2_Methylomirabilis_70_16 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cg1_0.2_scaffold_1458_c_11
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10781..11257
DNA (477bp) protein (159aa)
NADH (or F420H2) dehydrogenase subunit C (EC:1.6.99.5); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=CG_Delta_03
NADH (or F420H2) dehydrogenase subunit C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C id=2205998 bin=GWA2_Elusi-like_A8_64_40 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
cg1_0.2_scaffold_1458_c_12
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11321..12667
DNA (1347bp) protein (449aa)
nuoD; NADH dehydrogenase I subunit D; K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=CG_Delta_03
NADH-quinone oxidoreductase subunit D id=2999356 bin=GWA2_OP3_52_12 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
nuoD; NADH dehydrogenase I subunit D
cg1_0.2_scaffold_1458_c_13
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12839..13372
DNA (534bp) protein (178aa)
nuoE; NADH-quinone oxidoreductase subunit E (EC:1.6.99.5); K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=CG_Delta_03
nuoE; NADH-quinone oxidoreductase subunit E (EC:1.6.99.5)
NADH dehydrogenase I subunit E id=8266565 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
cg1_0.2_scaffold_1458_c_14
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13369..14655
DNA (1287bp) protein (429aa)
NADH dehydrogenase I subunit F; K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=CG_Delta_03
NADH-quinone oxidoreductase subunit F n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B34E5F
NADH dehydrogenase I subunit F
cg1_0.2_scaffold_1458_c_15
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14696..16258
DNA (1563bp) protein (521aa)
ferredoxin; K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3] Tax=CG_Delta_03
NADH dehydrogenase subunit G n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B681AB
ferredoxin
cg1_0.2_scaffold_1458_c_16
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16258..17388
DNA (1131bp) protein (377aa)
nuoH_[H]; NADH-ubiquinone oxidoreductase chain H (EC:1.6.5.3) Tax=CG_Delta_03
nuoH_[H]; NADH-ubiquinone oxidoreductase chain H (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit H id=2999337 bin=GWA2_OP3_52_12 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
cg1_0.2_scaffold_1458_c_17
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17388..17984
DNA (597bp) protein (199aa)
nuoI; NADH-quinone oxidoreductase subunit i (EC:1.6.99.5); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=CG_Delta_03
nuoI; NADH-quinone oxidoreductase subunit i (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit I n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B6348D
cg1_0.2_scaffold_1458_c_18
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17977..18486
DNA (510bp) protein (170aa)
NADH dehydrogenase subunit j (EC:1.6.5.3); K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=CG_Delta_03
NADH dehydrogenase subunit j (EC:1.6.5.3)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 id=3675336 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
cg1_0.2_scaffold_1458_c_19
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18486..18797
DNA (312bp) protein (104aa)
nuoK; NADH-quinone oxidoreductase subunit K (NADH dehydrogenase I, chain K) (NDH-1, chain K) (EC:1.6.5.3 1.6.99.5) Tax=CG_Delta_03
nuoK; NADH-quinone oxidoreductase subunit K (NADH dehydrogenase I, chain K) (NDH-1, chain K) (EC:1.6.5.3 1.6.99.5)
NADH-quinone oxidoreductase subunit K id=4115052 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
cg1_0.2_scaffold_1458_c_20
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18910..20904
DNA (1995bp) protein (665aa)
nuoL-1; NADH dehydrogenase I subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=CG_Delta_03
NADH-quinone oxidoreductase chain l id=2097104 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
nuoL-1; NADH dehydrogenase I subunit L
cg1_0.2_scaffold_1458_c_21
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20951..22456
DNA (1506bp) protein (502aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=CG_Delta_03
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] id=14623693 bin=bin5_DeltaP species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
cg1_0.2_scaffold_1458_c_22
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22453..23895
DNA (1443bp) protein (481aa)
nuoN-1; NADH dehydrogenase I subunit N (EC:1.6.5.3); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=CG_Delta_03
NADH-quinone oxidoreductase subunit N n=2 Tax=Geobacter sulfurreducens RepID=D7AE98_GEOSK
nuoN-1; NADH dehydrogenase I subunit N
Displaying 22 items

View Taxonomy