ggKbase home page

cg1_0.2_scaffold_4462_c

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_4462_c_trna_1
unknown

Not on your lists

comp(24..95)
DNA (72bp)
transferRNA
cg1_0.2_scaffold_4462_c_1
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

181..750
DNA (570bp) protein (190aa)
RecX 54..201 Tax=CG_GN02-01
RecX 54..201 id=124700 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg1_0.2_scaffold_4462_c_2
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(801..1586)
DNA (786bp) protein (262aa)
inosine 5'-monophosphate dehydrogenase (EC:1.1.1.205) Tax=CG_GN02-01
UPI0003CFBDD7 related cluster n=1 Tax=unknown RepID=UPI0003CFBDD7
hypothetical protein
cg1_0.2_scaffold_4462_c_3
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(1743..2246)
DNA (504bp) protein (168aa)
inosine 5-monophosphate dehydrogenase (EC:1.1.1.37); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=CG_GN02-01
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GXW0_9BACT
hypothetical protein
cg1_0.2_scaffold_4462_c_4
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(2350..3381)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z4T0_9BACT
DSBA oxidoreductase Tax=CG_GN02-01
Sodium/proton antiporter
cg1_0.2_scaffold_4462_c_5
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

3496..3762
DNA (267bp) protein (89aa)
Tax=CG_GN02-01
cg1_0.2_scaffold_4462_c_6
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(3927..4235)
DNA (309bp) protein (103aa)
transmembrane_regions 7..29 Tax=ACD78
transmembrane_regions 7..29 id=123709 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg1_0.2_scaffold_4462_c_7
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(4263..4643)
DNA (381bp) protein (127aa)
Tax=CG_GN02-01
cg1_0.2_scaffold_4462_c_8
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(4686..5087)
DNA (402bp) protein (134aa)
Tax=CG_GN02-01
cg1_0.2_scaffold_4462_c_9
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(5148..5519)
DNA (372bp) protein (124aa)
Tax=CG_GN02-01
cg1_0.2_scaffold_4462_c_10
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

5789..6328
DNA (540bp) protein (180aa)
coiled-coil 106..127 Tax=CG_GN02-01
coiled-coil 106..127 id=124673 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg1_0.2_scaffold_4462_c_11
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

6566..6922
DNA (357bp) protein (119aa)
Protein grpE n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KJW1_9FIRM id=49705 bin=ACD3 species=[Ruminococcus] torques genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
heat shock protein GrpE; K03687 molecular chaperone GrpE Tax=CG_GN02-01
molecular chaperone GrpE
cg1_0.2_scaffold_4462_c_12
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

6959..7132
DNA (174bp) protein (58aa)
Protein grpE n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KJW1_9FIRM id=69089 bin=ACD49 species=[Ruminococcus] torques genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Protein grpE Tax=CG_GN02-01
cg1_0.2_scaffold_4462_c_13
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(7288..7797)
DNA (510bp) protein (170aa)
Tax=CG_GN02-01
cg1_0.2_scaffold_4462_c_14
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(7864..9120)
DNA (1257bp) protein (419aa)
Tax=CG_GN02-01
cg1_0.2_scaffold_4462_c_15
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

9140..9688
DNA (549bp) protein (183aa)
Tax=CG_GN02-01
cg1_0.2_scaffold_4462_c_16
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(9637..10380)
DNA (744bp) protein (248aa)
Glycosyl transferase group 1 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2H1A2_9BACT
group 1 glycosyl transferase Tax=CG_GN02-01
group 1 glycosyl transferase
cg1_0.2_scaffold_4462_c_17
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(10685..11284)
DNA (600bp) protein (200aa)
seg 236..249 Tax=CG_GN02-01
seg 236..249 id=124743 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg1_0.2_scaffold_4462_c_18
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

11632..11898
DNA (267bp) protein (89aa)
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=CG_GN02-02
lba:Lebu_1168 DNA ligase, NAD-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] id=123425 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
ligA; DNA ligase
cg1_0.2_scaffold_4462_c_19
ACD78, Gracilibacteria, Bacteria

Not on your lists

12049..12141
DNA (93bp) protein (31aa)
lba:Lebu_1168 DNA ligase, NAD-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] id=123425 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
lba:Lebu_1168 DNA ligase, NAD-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=ACD78
cg1_0.2_scaffold_4462_c_20
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

12274..12414
DNA (141bp) protein (47aa)
ligA; DNA ligase, NAD-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=CG_GN02-02
lba:Lebu_1168 DNA ligase, NAD-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] id=123425 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
NAD-dependent DNA ligase (EC:6.5.1.2)
cg1_0.2_scaffold_4462_c_21

Not on your lists

12619..12828
DNA (210bp) protein (70aa)
lba:Lebu_1168 DNA ligase, NAD-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] id=123425 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
ligA; DNA ligase, NAD-dependent (EC:6.5.1.2)
Uncharacterized protein {ECO:0000313|EMBL:EKD29253.1}; Flags: Fragment;; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
cg1_0.2_scaffold_4462_c_22
ACD2, Gracilibacteria, Bacteria

Not on your lists

12904..13230
DNA (327bp) protein (109aa)
gmc:GY4MC1_3524 DNA ligase, NAD-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=ACD2
DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G4R1_9BACT
Displaying 23 items

View Taxonomy