ggKbase home page

cg1_0.2_scaffold_2985_c

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_2985_c_1
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(1..111)
DNA (111bp) protein (37aa)
hypothetical protein Tax=CG_GN02-01
hypothetical protein id=124043 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg1_0.2_scaffold_2985_c_2
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(214..591)
DNA (378bp) protein (126aa)
cth:Cthe_0895 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor id=124054 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
RNA polymerase sigma factor Tax=CG_GN02-01
rpoD1; RNA polymerase sigma factor RpoD
cg1_0.2_scaffold_2985_c_3
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(733..1191)
DNA (459bp) protein (153aa)
RpoD subfamily RNA polymerase sigma-70; K03086 RNA polymerase primary sigma factor Tax=CG_GN02-01
cth:Cthe_0895 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor id=124054 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
sigA; RNA polymerase major sigma-43 factor (sigma-A)
cg1_0.2_scaffold_2985_c_4
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(1309..1659)
DNA (351bp) protein (117aa)
cth:Cthe_0895 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=CG_GN02-01
cth:Cthe_0895 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor id=124054 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg1_0.2_scaffold_2985_c_5
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(1693..2283)
DNA (591bp) protein (197aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=CG_GN02-01
DNA primase; K02316 DNA primase [EC:2.7.7.-] id=124052 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg1_0.2_scaffold_2985_c_6
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(2308..2457)
DNA (150bp) protein (50aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=ACD78
DNA primase; K02316 DNA primase [EC:2.7.7.-] id=124052 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg1_0.2_scaffold_2985_c_7
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(2743..3375)
DNA (633bp) protein (211aa)
dnaG; DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] Tax=CG_GN02-01
DNA primase; K02316 DNA primase [EC:2.7.7.-] id=124052 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
dnaG; DNA primase (EC:2.7.7.-)
cg1_0.2_scaffold_2985_c_8
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(3604..4074)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YX64_9BACT
Uncharacterized protein Tax=CG_GN02-01
cg1_0.2_scaffold_2985_c_9
unknown

Not on your lists

comp(4200..4442)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NW92_9DELT Tax=ACD78
Putative uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NW92_9DELT id=124048 bin=ACD78 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg1_0.2_scaffold_2985_c_10
unknown

Not on your lists

comp(4596..4964)
DNA (369bp) protein (123aa)
GTP-binding protein Era n=1 Tax=Oribacterium sinus F0268 RepID=C2L1J1_9FIRM Tax=ACD78
GTPase Era id=2546046 bin=GWA2_Planctomycetia_40_7 species=Oribacterium sinus genus=Oribacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
putative GTP-binding protein
cg1_0.2_scaffold_2985_c_11
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(4965..5339)
DNA (375bp) protein (125aa)
GTP-binding protein Era n=1 Tax=Oribacterium sinus F0268 RepID=C2L1J1_9FIRM id=124050 bin=ACD78 species=Oribacterium sinus genus=Oribacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
GTP-binding protein Era; K03595 GTP-binding protein Era Tax=CG_GN02-01
GTP-binding protein Era
cg1_0.2_scaffold_2985_c_12
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(5450..5995)
DNA (546bp) protein (182aa)
tapB; type IV pilus assembly protein TapB; K02652 type IV pilus assembly protein PilB Tax=CG_GN02-01
aae:aq_1971 tapB; type IV pilus assembly protein TapB; K02652 type IV pilus assembly protein PilB id=69042 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
tapB; type IV pilus assembly protein TapB
cg1_0.2_scaffold_2985_c_13
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(6083..6619)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BC03_9BACT
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=CG_GN02-01
type II secretion system protein E
cg1_0.2_scaffold_2985_c_14
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

6968..7945
DNA (978bp) protein (326aa)
adventurous gliding motility protein AgmT Tax=CG_GN02-01
agmT; adventurous gliding motility protein AgmT; K07082 id=68832 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
cg1_0.2_scaffold_2985_c_15
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(7985..8161)
DNA (177bp) protein (59aa)
Tax=CG_GN02-01
cg1_0.2_scaffold_2985_c_16
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(8265..8711)
DNA (447bp) protein (149aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4); K01362 [EC:3.4.21.-] Tax=CG_GN02-01
Protease Do n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G4P0_9BACT
protease Do
cg1_0.2_scaffold_2985_c_17
unknown

Not on your lists

comp(8835..8966)
DNA (132bp) protein (44aa)

This feature has no annotations

cg1_0.2_scaffold_2985_c_18
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(9039..9446)
DNA (408bp) protein (136aa)
Protease Do n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G4P0_9BACT
Trypsin
Protease Do Tax=CG_GN02-01
cg1_0.2_scaffold_2985_c_19
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

9632..9928
DNA (297bp) protein (99aa)
hypothetical protein Tax=CG_GN02-01
hypothetical protein id=124187 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg1_0.2_scaffold_2985_c_20
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

10417..10587
DNA (171bp) protein (57aa)
Tax=CG_GN02-01
cg1_0.2_scaffold_2985_c_21
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

11173..11319
DNA (147bp) protein (49aa)
Tax=CG_GN02-01
cg1_0.2_scaffold_2985_c_22
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

11359..11631
DNA (273bp) protein (91aa)
Tax=CG_GN02-01
cg1_0.2_scaffold_2985_c_23
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

12199..12447
DNA (249bp) protein (83aa)
transmembrane_regions 13..35 Tax=CG_GN02-01
transmembrane_regions 13..35 id=131911 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
cg1_0.2_scaffold_2985_c_24
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists

12579..12851
DNA (273bp) protein (91aa)
hypothetical protein; K07002 id=3174167 bin=GWC1_CPR2_39_9 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKQ93711.1}; TaxID=1618345 species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC2_39_10.;"
cg1_0.2_scaffold_2985_c_25
unknown

Not on your lists

13119..13271
DNA (153bp) protein (51aa)

This feature has no annotations

cg1_0.2_scaffold_2985_c_26
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

13433..14212
DNA (780bp) protein (260aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=CG_GN02-01
sta:STHERM_c15920 isoleucyl-tRNA synthetase (EC:6.1.1.5) id=50893 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
isoleucyl-tRNA synthetase (EC:6.1.1.5)
cg1_0.2_scaffold_2985_c_27
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

14399..16036
DNA (1638bp) protein (546aa)
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=CG_GN02-01
ssm:Spirs_1894 isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=69429 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
ileS; isoleucyl-tRNA synthetase
cg1_0.2_scaffold_2985_c_28
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

16325..17023
DNA (699bp) protein (233aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=CG_GN02-01
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YC26_9BACT
Displaying 28 items

View Taxonomy