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cg1_0.2_scaffold_530_c

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_530_c_1
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

256..1098
DNA (843bp) protein (281aa)
transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] Tax=CG_Nitrosp_02
transketolase (EC:2.2.1.1)
Transketolase id=4478338 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg1_0.2_scaffold_530_c_2
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

1088..2029
DNA (942bp) protein (314aa)
transketolase domain protein; K00615 transketolase [EC:2.2.1.1] Tax=CG_Nitrosp_02
Transketolase domain protein id=4478337 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
transketolase domain-containing protein
cg1_0.2_scaffold_530_c_3
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

2054..2716
DNA (663bp) protein (221aa)
ftsE; cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=CG_Nitrosp_02
Cell division ATP-binding protein FtsE id=4666081 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
ftsE; cell division ATP-binding protein FtsE
cg1_0.2_scaffold_530_c_4
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

2717..3592
DNA (876bp) protein (292aa)
efflux ABC transporter permease; K09811 cell division transport system permease protein Tax=CG_Nitrosp_02
Efflux ABC transporter, permease protein id=4666082 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
efflux ABC transporter permease
cg1_0.2_scaffold_530_c_5
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

3598..4848
DNA (1251bp) protein (417aa)
peptidase M23B Tax=CG_Nitrosp_02
Peptidase M23B, putative id=4478334 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
peptidase M23B
cg1_0.2_scaffold_530_c_6
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

4887..6203
DNA (1317bp) protein (439aa)
carboxy-terminal processing protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=CG_Nitrosp_02
carboxy-terminal processing protease (EC:3.4.21.102)
Carboxy-terminal processing protease id=4478333 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg1_0.2_scaffold_530_c_7
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

6205..6879
DNA (675bp) protein (225aa)
Putative PolB-like 3'-5' exonuclease; K07501 hypothetical protein Tax=CG_Nitrosp_02
Hypothetical conserved protein id=4478332 bin=GWF2_Nitrospirae_44_13 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
PolB-like 3'-5' exonuclease
cg1_0.2_scaffold_530_c_8
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(6871..8007)
DNA (1137bp) protein (379aa)
hypothetical protein Tax=CG_Nitrosp_02
Aminoglycoside phosphotransferase id=4370518 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
cg1_0.2_scaffold_530_c_9
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(8010..8942)
DNA (933bp) protein (311aa)
adenosine kinase (EC:2.7.1.20); K00856 adenosine kinase [EC:2.7.1.20] Tax=CG_Nitrosp_02
adenosine kinase (EC:2.7.1.20)
Adenosine kinase id=3240794 bin=GWF2_Nitrospirae_44_13 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg1_0.2_scaffold_530_c_10
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(8954..10735)
DNA (1782bp) protein (594aa)
uvrC; excinuclease ABC, C subunit; K03703 excinuclease ABC subunit C Tax=CG_Nitrosp_02
UvrABC system protein C id=3240798 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
uvrC; excinuclease ABC subunit C
cg1_0.2_scaffold_530_c_11
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

11243..13417
DNA (2175bp) protein (725aa)
helicase RecD/TraA family protein; K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] Tax=CG_Nitrosp_02
Similar to exodeoxyribonuclease V alpha subunit n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4N1_9BACT
helicase RecD/TraA family protein
cg1_0.2_scaffold_530_c_12
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(13418..14398)
DNA (981bp) protein (327aa)
accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=CG_Nitrosp_02
accA; acetyl-CoA carboxylase, carboxyl transferase subuit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha id=4335317 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
cg1_0.2_scaffold_530_c_13
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(14395..17814)
DNA (3420bp) protein (1140aa)
DNA polymerase III alpha subunit (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=CG_Nitrosp_02
DNA polymerase III subuit alpha (EC:2.7.7.7)
DNA polymerase III alpha subunit id=4335316 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
cg1_0.2_scaffold_530_c_14
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

17832..20216
DNA (2385bp) protein (795aa)
penicillin-binding protein 1 Tax=CG_Nitrosp_02
Penicillin-binding protein 1 id=3426822 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
penicillin-binding protein 1
cg1_0.2_scaffold_530_c_15
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

20365..21060
DNA (696bp) protein (232aa)
atpB; ATP synthase F0, A subunit (EC:3.6.3.14); K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] Tax=CG_Nitrosp_02
atpB; ATP synthase F0 subunit A (EC:3.6.3.14)
ATP synthase subunit a id=3967531 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg1_0.2_scaffold_530_c_16
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

21095..21454
DNA (360bp) protein (120aa)
ATP synthase subunit C (EC:3.6.3.14); K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] Tax=CG_Nitrosp_02
ATP synthase subunit C (EC:3.6.3.14)
ATP synthase F0, C subunit id=2015840 bin=GWB2_Nitrospirae_rel_47_37 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
cg1_0.2_scaffold_530_c_17
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

21593..22360
DNA (768bp) protein (256aa)
hypothetical protein Tax=CG_Nitrosp_02
Putative uncharacterized protein id=2099869 bin=GWD2_Nitrospirae-related_57_8 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein
cg1_0.2_scaffold_530_c_18
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

22525..23544
DNA (1020bp) protein (340aa)
two component, sigma54 specific, transcriptional regulator, Fis family; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=CG_Nitrosp_02
Two component, sigma54 specific, transcriptional regulator, Fis family id=3721120 bin=GWF2_Nitrospirae_44_13 species=Thermovibrio ammonificans genus=Thermovibrio taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
two component, sigma54 specific, transcriptional regulator, Fis family
cg1_0.2_scaffold_530_c_19
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(23627..23797)
DNA (171bp) protein (57aa)
Tax=CG_Nitrosp_02
cg1_0.2_scaffold_530_c_20
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(23827..24486)
DNA (660bp) protein (220aa)
hypothetical protein Tax=CG_Nitrosp_02
Dienelactone hydrolase id=1887218 bin=GWD2_Nitrospirae-related_57_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein
cg1_0.2_scaffold_530_c_21
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24971..25108)
DNA (138bp) protein (46aa)
hypothetical protein Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
cg1_0.2_scaffold_530_c_22
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

25622..25954
DNA (333bp) protein (111aa)
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=CG_Nitrosp_02
RNA polymerase sigma factor id=3240021 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
RNA polymerase sigma factor RpoD
cg1_0.2_scaffold_530_c_23
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

26520..27488
DNA (969bp) protein (323aa)
galE; UDP-glucose-4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=CG_Nitrosp_02
UDP-glucose-4-epimerase n=1 Tax=Aquifex aeolicus (strain VF5) RepID=O67164_AQUAE
galE; UDP-glucose-4-epimerase
cg1_0.2_scaffold_530_c_24
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

27464..29011
DNA (1548bp) protein (516aa)
beta-glucosidase; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52] Tax=CG_Nitrosp_02
Beta-glucosidase id=2283941 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
beta-glucosidase
cg1_0.2_scaffold_530_c_25
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

29001..30251
DNA (1251bp) protein (417aa)
ampG; muropeptide transporter; K08218 MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG Tax=CG_Nitrosp_02
Protein AmpG id=2170801 bin=GWB2_Nitrospirae_rel_47_37 species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
ampG; muropeptide transporter
cg1_0.2_scaffold_530_c_26
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(30253..30996)
DNA (744bp) protein (248aa)
hypothetical protein Tax=CG_Nitrosp_02
hypothetical protein id=14425358 bin=bin1_lowGC species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
cg1_0.2_scaffold_530_c_27
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

31153..32010
DNA (858bp) protein (286aa)
N-acetylglucosamine-6-phosphate deacetylase; K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] Tax=CG_Nitrosp_02
N-acetylglucosamine-6-phosphate deacetylase id=2170797 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
N-acetylglucosamine-6-phosphate deacetylase
cg1_0.2_scaffold_530_c_28
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

32163..32645
DNA (483bp) protein (161aa)
nusg antitermination factor; K05785 transcriptional antiterminator RfaH Tax=CG_Nitrosp_02
NusG antitermination factor id=4104374 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
nusg antitermination factor
cg1_0.2_scaffold_530_c_29
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

32670..33542
DNA (873bp) protein (291aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=CG_Nitrosp_02
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=planctomycete KSU-1 RepID=I3IQU3_9PLAN
cg1_0.2_scaffold_530_c_30
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

33579..34196
DNA (618bp) protein (206aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=CG_Nitrosp_02
dTDP-4-deoxyrhamnose 3,5 epimerase n=1 Tax=planctomycete KSU-1 RepID=I3IQU1_9PLAN
putative dTDP-4-deoxyrhamnose 3,5 epimerase
Displaying items 1-30 of 39 in total

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