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cg1_0.2_scaffold_4881_c

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg1_0.2_scaffold_4881_c_1

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comp(2..292)
DNA (291bp) protein (97aa)
Recombinase {ECO:0000313|EMBL:KKU78060.1}; TaxID=1618845 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_64.;"
Recombinase id=1782254 bin=GWE2_Bacteroidetes_41_25 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
cg1_0.2_scaffold_4881_c_2
RIFOXYB1_FULL_RIF_OD1_07_40_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

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comp(657..1406)
DNA (750bp) protein (250aa)
Tax=RIFOXYB1_FULL_RIF_OD1_07_40_15_curated
cg1_0.2_scaffold_4881_c_3
CG_CPR12_01, CG_CPR12, Bacteria

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comp(2160..2909)
DNA (750bp) protein (250aa)
putative lipoprotein Tax=CG_CPR12_01
hypothetical protein id=5801815 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
DSBA oxidoreductase
cg1_0.2_scaffold_4881_c_trna_1
unknown

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comp(3068..3139)
DNA (72bp)
transferRNA
cg1_0.2_scaffold_4881_c_4
CG_CPR12_01, CG_CPR12, Bacteria

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3146..4225
DNA (1080bp) protein (360aa)
putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=CG_CPR12_01
glycoprotease family metalloendopeptidase (EC:3.4.24.57)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp id=3415445 bin=GWA2_CPR4_42_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
cg1_0.2_scaffold_4881_c_5
CG_CPR12_01, CG_CPR12, Bacteria

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4222..4668
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N3I5_9BACT id=87236 bin=ACD58 species=Victivallis vadensis genus=Victivallis taxon_order=unknown taxon_class=Lentisphaeria phylum=Lentisphaerae tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
ATPase or kinase; K06925 UPF0079 ATP-binding protein Tax=CG_CPR12_01
ATPase or kinase
cg1_0.2_scaffold_4881_c_6
CG_CPR12_01, CG_CPR12, Bacteria

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comp(4743..6443)
DNA (1701bp) protein (567aa)
GspE; pili biogenesis protein PilB-like ATPase; K02652 type IV pilus assembly protein PilB Tax=CG_CPR12_01
Type II secretion system protein E id=1899113 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
GspE; pili biogenesis protein PilB-like ATPase
cg1_0.2_scaffold_4881_c_7
CG_CPR12_01, CG_CPR12, Bacteria

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comp(6466..7470)
DNA (1005bp) protein (335aa)
Tax=CG_CPR12_01
cg1_0.2_scaffold_4881_c_8
CG_CPR12_01, CG_CPR12, Bacteria

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comp(7638..9101)
DNA (1464bp) protein (488aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=CG_CPR12_01
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A id=2199604 bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
cg1_0.2_scaffold_4881_c_9
CG_CPR12_01, CG_CPR12, Bacteria

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comp(9108..9401)
DNA (294bp) protein (98aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=CG_CPR12_01
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=uncultured bacterium RepID=K2EHL6_9BACT
cg1_0.2_scaffold_4881_c_10
CG_CPR12_01, CG_CPR12, Bacteria

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comp(9445..11493)
DNA (2049bp) protein (683aa)
DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=CG_CPR12_01
hypothetical protein id=5801436 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
DNA ligase
cg1_0.2_scaffold_4881_c_11
CG_CPR12_01, CG_CPR12, Bacteria

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comp(11592..12344)
DNA (753bp) protein (251aa)
Tax=CG_CPR12_01
cg1_0.2_scaffold_4881_c_12
unknown

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comp(12414..12620)
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying 13 items

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