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cg_0.2_sub10_scaffold_76_c

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Displaying items 1-30 of 67 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_76_c_1
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(338..532)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000382E7E7 rbh
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg_0.2_sub10_scaffold_76_c_2
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(534..872)
DNA (339bp) protein (113aa)
ferredoxin, 2Fe-2S type, ISC system; K04755 ferredoxin, 2Fe-2S Tax=CG_Hydro_01
ferredoxin, 2Fe-2S type; K04755 ferredoxin, 2Fe-2S id=12497191 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
ferredoxin, 2Fe-2S type, ISC system
cg_0.2_sub10_scaffold_76_c_3
unknown

Not on your lists

comp(860..1018)
DNA (159bp) protein (53aa)

This feature has no annotations

cg_0.2_sub10_scaffold_76_c_4
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1022..2890)
DNA (1869bp) protein (623aa)
hscA; chaperone protein HscA; K04044 molecular chaperone HscA Tax=CG_Hydro_01
Chaperone protein HscA homolog id=1326615 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hscA; chaperone protein HscA
cg_0.2_sub10_scaffold_76_c_5
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2900..3424)
DNA (525bp) protein (175aa)
Co-chaperone protein HscB homolog n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CLN5_SIDLE rbh
co-chaperone Hsc20; K04082 molecular chaperone HscB Tax=CG_Hydro_01
co-chaperone Hsc20
cg_0.2_sub10_scaffold_76_c_6
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3467..3790)
DNA (324bp) protein (108aa)
Iron-sulfur cluster assembly protein IscA n=2 Tax=Pseudogulbenkiania RepID=G2IZ70_PSEUL rbh
iscA; iron-sulfur cluster assembly protein IscA; K13628 iron-sulfur cluster assembly protein Tax=CG_Hydro_01
iscA; iron-sulfur cluster assembly protein IscA
cg_0.2_sub10_scaffold_76_c_7
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3793..4215)
DNA (423bp) protein (141aa)
FeS cluster assembly scaffold IscU n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA18_9PROT rbh
nifU; FeS cluster assembly scaffold IscU Tax=CG_Hydro_01
nifU; FeS cluster assembly scaffold IscU
cg_0.2_sub10_scaffold_76_c_8
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4249..5460)
DNA (1212bp) protein (404aa)
cysteine desulfurase IscS; K04487 cysteine desulfurase [EC:2.8.1.7] Tax=CG_Hydro_01
cysteine desulfurase n=1 Tax=Leeia oryzae RepID=UPI00035FBCD7 rbh
cysteine desulfurase IscS
cg_0.2_sub10_scaffold_76_c_9
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5472..5945)
DNA (474bp) protein (158aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CLN9_SIDLE rbh
BadM/Rrf2 family transcriptional regulator; K13643 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor Tax=CG_Hydro_01
BadM/Rrf2 family transcriptional regulator
cg_0.2_sub10_scaffold_76_c_10
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6011..6763)
DNA (753bp) protein (251aa)
serine O-acetyltransferase (EC:2.3.1.30) Tax=CG_Hydro_01
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AGE2_9PROT rbh
cg_0.2_sub10_scaffold_76_c_11
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6820..7539)
DNA (720bp) protein (240aa)
RNA methyltransferase TrmH; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-] Tax=CG_Hydro_01
tRNA:Cm32/Um32 methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFT9_9PROT rbh
RNA methyltransferase TrmH
cg_0.2_sub10_scaffold_76_c_12
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7590..8378
DNA (789bp) protein (263aa)
inositol-1(or 4)-monophosphatase (EC:3.1.3.25) Tax=CG_Hydro_01
inositol-1(or 4)-monophosphatase (EC:3.1.3.25)
Inositol-1(Or 4)-monophosphatase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AKE4_9PROT rbh
cg_0.2_sub10_scaffold_76_c_13
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8411..9040)
DNA (630bp) protein (210aa)
Cytochrome c, class I n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3N7_ACISJ rbh
class I cytochrome c Tax=CG_Hydro_01
class I cytochrome c
cg_0.2_sub10_scaffold_76_c_14
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9218..11737
DNA (2520bp) protein (840aa)
DNA mismatch repair protein MutS n=1 Tax=Thiobacillus denitrificans RepID=UPI00037179EB rbh
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=CG_Hydro_01
DNA mismatch repair protein MutS
cg_0.2_sub10_scaffold_76_c_15
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11744..13273)
DNA (1530bp) protein (510aa)
diguanylate cyclase n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B618C7 rbh
GGDEF domain protein Tax=CG_Hydro_01
GGDEF domain protein
cg_0.2_sub10_scaffold_76_c_16
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13473..13757
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AEQ3_9PROT rbh
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg_0.2_sub10_scaffold_76_c_17
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14001..14933
DNA (933bp) protein (311aa)
nucleoside-diphosphate-sugar epimerase; K00329 NADH dehydrogenase [EC:1.6.5.3]; K00356 NADH dehydrogenase [EC:1.6.99.3] Tax=CG_Hydro_01
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000363B4E0 rbh
nucleoside-diphosphate-sugar epimerase
cg_0.2_sub10_scaffold_76_c_18
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14930..16168
DNA (1239bp) protein (413aa)
metal dependent phosphohydrolase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] id=12496543 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
tRNA nucleotidyltransferase Tax=CG_Hydro_01
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
cg_0.2_sub10_scaffold_76_c_19
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16165..17016
DNA (852bp) protein (284aa)
radical SAM protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DF380 rbh
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg_0.2_sub10_scaffold_76_c_20
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17357..18079)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Marichromatium purpuratum 984 RepID=F9TYJ8_MARPU
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg_0.2_sub10_scaffold_76_c_21
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18232..19539
DNA (1308bp) protein (436aa)
Peptidase M23 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B7A1_9PROT rbh
peptidase M23 Tax=CG_Hydro_01
peptidase M23
cg_0.2_sub10_scaffold_76_c_22
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19564..20334)
DNA (771bp) protein (257aa)
Cell division protein ZapD n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJ33_9PROT rbh
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg_0.2_sub10_scaffold_76_c_23
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20463..21104)
DNA (642bp) protein (214aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Thauera sp. 27 RepID=N6YN59_9RHOO rbh
coaE; dephospho-CoA kinase Tax=CG_Hydro_01
cg_0.2_sub10_scaffold_76_c_24
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21101..21952)
DNA (852bp) protein (284aa)
prepilin peptidase (EC:3.4.23.43) Tax=CG_Hydro_01
prepilin peptidase (EC:3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AN73_9PROT rbh
cg_0.2_sub10_scaffold_76_c_25
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21949..23172)
DNA (1224bp) protein (408aa)
type II secretion system protein Tax=CG_Hydro_01
type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC id=12496534 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
type II secretion system protein
cg_0.2_sub10_scaffold_76_c_26
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23189..24910)
DNA (1722bp) protein (574aa)
type II secretory protein GspE n=1 Tax=Thiobacillus thioparus RepID=UPI00036CA70B rbh
type IV pilus assembly protein, PilB Tax=CG_Hydro_01
type IV pilus assembly protein, PilB
cg_0.2_sub10_scaffold_76_c_27
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24995..26185)
DNA (1191bp) protein (397aa)
corB; hypothetical protein Tax=CG_Hydro_01
Probable transmembrane protein id=1368679 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
corB; hypothetical protein
cg_0.2_sub10_scaffold_76_c_28
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26327..27133)
DNA (807bp) protein (269aa)
CcsA-related protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHP5_9PROT rbh
cytochrome c assembly protein Tax=CG_Hydro_01
cytochrome c assembly protein
cg_0.2_sub10_scaffold_76_c_29
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


27200..28546
DNA (1347bp) protein (449aa)
Signal recognition particle protein n=2 Tax=Thauera RepID=N6YAN0_9RHOO rbh
ffH; signal recognition particle protein Tax=CG_Hydro_01
ffH; signal recognition particle protein
cg_0.2_sub10_scaffold_76_c_30
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


28696..28947
DNA (252bp) protein (84aa)
30S ribosomal protein S16 n=1 Tax=Herminiimonas arsenicoxydans RepID=RS16_HERAR rbh
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=CG_Hydro_01
rpsP; 30S ribosomal protein S16
Displaying items 1-30 of 67 in total

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