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cg_0.2_sub10_scaffold_256_c

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_256_c_1
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..219
DNA (219bp) protein (73aa)
Arabinose efflux permease family protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKB1_AZOSU
arabinose efflux permease family protein Tax=CG_Hydro_01
arabinose efflux permease family protein
cg_0.2_sub10_scaffold_256_c_2
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

222..1055
DNA (834bp) protein (278aa)
putative periplasmic-binding protein; K02044 phosphonate transport system substrate-binding protein Tax=CG_Hydro_01
Putative uncharacterized protein id=1314843 bin=GWE1_T_denit_62_9 species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
phnD; phosphonate transport system substrate-binding protein
cg_0.2_sub10_scaffold_256_c_3
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1058..4243
DNA (3186bp) protein (1062aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Marichromatium purpuratum 984 RepID=F9U1C2_MARPU rbh
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Tax=CG_Hydro_01
diguanylate cyclase
cg_0.2_sub10_scaffold_256_c_4
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4248..6029
DNA (1782bp) protein (594aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=CG_Hydro_01
Asparagine synthetase id=1335206 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
asparagine synthase
cg_0.2_sub10_scaffold_256_c_5
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6052..8013)
DNA (1962bp) protein (654aa)
PAS:ATP-binding region, ATPase-like:Histidine kinase A-like n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NV08_9DELT rbh
PAS/PAC sensor signal transduction histidine kinase Tax=CG_Hydro_01
PAS/PAC sensor signal transduction histidine kinase
cg_0.2_sub10_scaffold_256_c_6
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8145..8702
DNA (558bp) protein (186aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=CG_Hydro_01
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI000371A289 rbh
cg_0.2_sub10_scaffold_256_c_7
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8692..9615
DNA (924bp) protein (308aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=CG_Hydro_01
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0U7_HALNC rbh
cg_0.2_sub10_scaffold_256_c_8
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9618..10703
DNA (1086bp) protein (362aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=CG_Hydro_01
dTDP-glucose 4,6-dehydratase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0U8_HALNC rbh
dTDP-glucose 4,6-dehydratase
cg_0.2_sub10_scaffold_256_c_9
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10745..10975
DNA (231bp) protein (77aa)
AbrB family transcriptional regulator n=1 Tax=Azoarcus toluclasticus RepID=UPI00035CD388 rbh
AbrB family transcriptional regulator Tax=CG_Hydro_01
AbrB family transcriptional regulator
cg_0.2_sub10_scaffold_256_c_10
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10965..11303
DNA (339bp) protein (113aa)
Transcriptional modulator of MazE/toxin, MazF n=1 Tax=mine drainage metagenome RepID=T0Y8X3_9ZZZZ rbh
transcriptional modulator of MazE/toxin MazF Tax=CG_Hydro_01
transcriptional modulator of MazE/toxin MazF
cg_0.2_sub10_scaffold_256_c_11
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11625..12491
DNA (867bp) protein (289aa)
glucose-1-phosphate thymidylyltransferase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=CG_Hydro_01
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5L4_THIK1 rbh
glucose-1-phosphate thymidylyltransferase
cg_0.2_sub10_scaffold_256_c_12
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12478..14307)
DNA (1830bp) protein (610aa)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=CG_Hydro_01
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7P091_CHRVO rbh
cg_0.2_sub10_scaffold_256_c_13
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14328..15695)
DNA (1368bp) protein (456aa)
glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase (EC:2.3.1.157 2.7.7.23) Tax=CG_Hydro_01
glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase (EC:2.3.1.157 2.7.7.23)
Bifunctional protein GlmU n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B918_9PROT rbh
cg_0.2_sub10_scaffold_256_c_14
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15768..16190)
DNA (423bp) protein (141aa)
ATP synthase F1 subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14] Tax=CG_Hydro_01
F0F1 ATP synthase subunit epsilon n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI0003605E71 rbh
ATP synthase F1 subunit epsilon
cg_0.2_sub10_scaffold_256_c_15
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16268..17665)
DNA (1398bp) protein (466aa)
F0F1 ATP synthase subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] Tax=CG_Hydro_01
ATP synthase F0F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=ATPB_THIDA rbh
cg_0.2_sub10_scaffold_256_c_16
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17709..18569)
DNA (861bp) protein (287aa)
F0F1 ATP synthase subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] Tax=CG_Hydro_01
F0F1 ATP synthase subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] id=12496112 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
ATP synthase F0F1 subunit gamma (EC:3.6.3.14)
cg_0.2_sub10_scaffold_256_c_17
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18583..20124)
DNA (1542bp) protein (514aa)
ATP synthase subunit alpha n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AKA7_9PROT rbh
atpF1A; F0F1 ATP synthase subunit alpha Tax=CG_Hydro_01
atpF1A; F0F1 ATP synthase subunit alpha
cg_0.2_sub10_scaffold_256_c_18
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20144..20680)
DNA (537bp) protein (179aa)
ATP synthase F1 subunit delta; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=CG_Hydro_01
ATP synthase subunit delta n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK73_9PROT rbh
ATP synthase F1 subunit delta
cg_0.2_sub10_scaffold_256_c_19
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20683..21153)
DNA (471bp) protein (157aa)
F-type H+-transporting ATP synthase subunit B (EC:3.6.3.14) Tax=CG_Hydro_01
F-type H+-transporting ATP synthase subunit B (EC:3.6.3.14); K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] id=12494014 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
F-type H+-transporting ATP synthase subunit B (EC:3.6.3.14)
cg_0.2_sub10_scaffold_256_c_20
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21212..21451)
DNA (240bp) protein (80aa)
F0F1 ATP synthase subunit C (EC:3.6.3.14); K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] Tax=CG_Hydro_01
ATP synthase F0F1 subunit C (EC:3.6.3.14)
ATP synthase subunit a n=2 Tax=sulfur-oxidizing symbionts RepID=G2D9T5_9GAMM rbh
cg_0.2_sub10_scaffold_256_c_21
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21499..22341)
DNA (843bp) protein (281aa)
Membrane-bound ATP synthase, F0 sector, subunit a, important for FO assembly n=1 Tax=mine drainage metagenome RepID=E6QSC2_9ZZZZ rbh
ATP synthase F0, A subunit Tax=CG_Hydro_01
ATP synthase F0, A subunit
cg_0.2_sub10_scaffold_256_c_22
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22344..22619)
DNA (276bp) protein (92aa)
Tax=CG_Hydro_01
cg_0.2_sub10_scaffold_256_c_23
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22781..23620)
DNA (840bp) protein (280aa)
Chromosome segregation DNA-binding protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q477Z9_DECAR rbh
chromosome segregation DNA-binding protein; K03497 chromosome partitioning protein, ParB family Tax=CG_Hydro_01
chromosome segregation DNA-binding protein
cg_0.2_sub10_scaffold_256_c_24
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23620..24408)
DNA (789bp) protein (263aa)
chromosome segregation ATPase; K03496 chromosome partitioning protein Tax=CG_Hydro_01
conserved protein of unknown function
chromosome segregation ATPase; K03496 chromosome partitioning protein id=12494009 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
cg_0.2_sub10_scaffold_256_c_25
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24405..25025)
DNA (621bp) protein (207aa)
gidB; 16S rRNA methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=CG_Hydro_01
gidB; 16S rRNA methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] id=12496102 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
gidB; 16S rRNA methyltransferase GidB
cg_0.2_sub10_scaffold_256_c_26
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25022..26917)
DNA (1896bp) protein (632aa)
tRNA uridine 5-carboxymethylaminomethyl modification protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381BD5C rbh
glucose inhibited division protein A Tax=CG_Hydro_01
glucose inhibited division protein A
cg_0.2_sub10_scaffold_256_c_27
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27029..28837)
DNA (1809bp) protein (603aa)
ABC transporter ATPase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF47_THIDA rbh
ABC transporter ATPase; K06148 ATP-binding cassette, subfamily C, bacterial Tax=CG_Hydro_01
ABC transporter ATPase
cg_0.2_sub10_scaffold_256_c_28
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28898..29185
DNA (288bp) protein (96aa)
Tax=CG_Hydro_01
cg_0.2_sub10_scaffold_256_c_29
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29335..29583
DNA (249bp) protein (83aa)
Transposase, mutator type n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XCD6_9RALS
transposase
Transposase {ECO:0000313|EMBL:AJP49570.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;"
Displaying 29 items

View Taxonomy