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cg_0.2_sub10_scaffold_255_c

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Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_255_c_1
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..275
DNA (273bp) protein (91aa)
sulfur oxidation protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036F3BCA rbh
sulfur compound chelating protein SoxZ Tax=RBG_16_Betaproteobacteria_58_11_curated
soxZ; sulfur oxidation protein SoxZ
cg_0.2_sub10_scaffold_255_c_2
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

423..890
DNA (468bp) protein (156aa)
Cytochrome c class I n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXN5_9GAMM rbh
soxX; Monoheme cytochrome c SoxX Tax=CG_Hydro_01
soxX; Monoheme cytochrome c sulfur oxidizing protein(SoxX)
cg_0.2_sub10_scaffold_255_c_3
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

898..1674
DNA (777bp) protein (259aa)
SoxAX cytochrome complex subunit A n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXN6_9GAMM rbh
soxA; diheme cytochrome C Tax=CG_Hydro_01
soxA; diheme cytochrome C
cg_0.2_sub10_scaffold_255_c_4
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1939..3666
DNA (1728bp) protein (576aa)
sulfate thiol esterase SoxB Tax=CG_Hydro_01
Probable sulfur oxidation signal protein, twin-arginine translocation pathway id=1345670 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
sulfate thiol esterase SoxB
cg_0.2_sub10_scaffold_255_c_5
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3678..4208)
DNA (531bp) protein (177aa)
Tax=CG_Hydro_01
cg_0.2_sub10_scaffold_255_c_6
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4299..4496
DNA (198bp) protein (66aa)
hypothetical protein Tax=CG_Hydro_01
Putative uncharacterized protein id=1362424 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hypothetical protein
cg_0.2_sub10_scaffold_255_c_7
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4493..5968)
DNA (1476bp) protein (492aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQF7_SIDLE rbh
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg_0.2_sub10_scaffold_255_c_8
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5993..7045)
DNA (1053bp) protein (351aa)
dihydroorotate dehydrogenase 2 (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=CG_Hydro_01
dihydroorotate dehydrogenase 2 (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] id=12494736 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
dihydroorotate dehydrogenase 2 (EC:1.3.3.1)
cg_0.2_sub10_scaffold_255_c_9
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7011..10589)
DNA (3579bp) protein (1193aa)
pyruvate:ferredoxin (flavodoxin) oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase [EC:1.2.7.-] Tax=CG_Hydro_01
Pyruvate-flavodoxin oxidoreductase id=1344875 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
pyruvate:ferredoxin (flavodoxin) oxidoreductase
cg_0.2_sub10_scaffold_255_c_10
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10614..12392)
DNA (1779bp) protein (593aa)
nickel-dependent hydrogenase large subunit; K06281 hydrogenase large subunit [EC:1.12.99.6] Tax=CG_Hydro_01
Ni-Fe hydrogenase large chain (EC:1.12.99.6); K06281 hydrogenase large subunit [EC:1.12.99.6] id=12493972 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
nickel-dependent hydrogenase large subunit
cg_0.2_sub10_scaffold_255_c_11
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12403..12849)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSB5_SIDLE rbh
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg_0.2_sub10_scaffold_255_c_12
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12860..14119)
DNA (1260bp) protein (420aa)
hypothetical protein Tax=CG_Hydro_01
hypothetical protein id=12493973 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein
cg_0.2_sub10_scaffold_255_c_13
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14116..14775)
DNA (660bp) protein (220aa)
hypothetical protein Tax=CG_Hydro_01
Putative uncharacterized protein id=1337330 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hypothetical protein
cg_0.2_sub10_scaffold_255_c_14
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14785..15873)
DNA (1089bp) protein (363aa)
Ni-Fe hydrogenase, small subunit (EC:1.12.99.6); K06282 hydrogenase small subunit [EC:1.12.99.6] Tax=CG_Hydro_01
Ni-Fe hydrogenase, small subunit (EC:1.12.99.6)
Ni/Fe hydrogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003725572 rbh
cg_0.2_sub10_scaffold_255_c_15
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15964..16440)
DNA (477bp) protein (159aa)
peptidase M52, hydrogen uptake protein; K03605 hydrogenase 1 maturation protease [EC:3.4.24.-] Tax=CG_Hydro_01
peptidase M52, hydrogen uptake protein; K03605 hydrogenase 1 maturation protease [EC:3.4.24.-] id=12497094 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
peptidase M52, hydrogen uptake protein
cg_0.2_sub10_scaffold_255_c_16
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16412..16708)
DNA (297bp) protein (99aa)
Flagellar related protein n=2 Tax=Thauera RepID=C4KAR6_THASP rbh
flagellar-like protein; K04061 flagellar biosynthesis protein Tax=CG_Hydro_01
flagellar-like protein
cg_0.2_sub10_scaffold_255_c_17
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16695..17867)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CUF8_9BURK rbh
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg_0.2_sub10_scaffold_255_c_18
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17991..18362)
DNA (372bp) protein (124aa)
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg_0.2_sub10_scaffold_255_c_19
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18375..22049)
DNA (3675bp) protein (1225aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003797077 rbh
family 2 glycosyl transferase Tax=CG_Hydro_01
family 2 glycosyl transferase
cg_0.2_sub10_scaffold_255_c_20
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22119..22865)
DNA (747bp) protein (249aa)
hypothetical protein Tax=CG_Hydro_01
hypothetical protein id=12493919 bin=THIO_HI species=Rheinheimera sp. A13L genus=Rheinheimera taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
methyltransferase type 12
cg_0.2_sub10_scaffold_255_c_21
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22855..23325)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00036C2C18
putative acetyltransferase Tax=CG_Hydro_01
hypothetical protein
cg_0.2_sub10_scaffold_255_c_22
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23322..24281)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037C9350 rbh
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg_0.2_sub10_scaffold_255_c_23
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24288..25250)
DNA (963bp) protein (321aa)
glycosylase n=1 Tax=Rhizobium leguminosarum RepID=UPI000361F670 rbh
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg_0.2_sub10_scaffold_255_c_24
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25254..25952)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003630E11 rbh
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg_0.2_sub10_scaffold_255_c_25
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25996..27117)
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035FFC76 rbh
aminotransferase DegT/DnrJ/EryC1/StrS family Tax=CG_Hydro_01
aminotransferase DegT/DnrJ/EryC1/StrS family
cg_0.2_sub10_scaffold_255_c_26
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27184..27555)
DNA (372bp) protein (124aa)
flaF; flagellar biosynthesis regulatory protein FlaF; K06602 flagellar protein FlaF Tax=CG_Hydro_01
flaF; flagellar biosynthesis regulatory protein FlaF
cg_0.2_sub10_scaffold_255_c_27
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27545..27934)
DNA (390bp) protein (130aa)
Flagellar FlbT family protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WV53_GEOS8 rbh
flagellar FlbT family protein; K06601 flagellar protein FlbT Tax=CG_Hydro_01
flagellar FlbT family protein
cg_0.2_sub10_scaffold_255_c_28
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27977..28594)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WV54_GEOS8 rbh
hypothetical protein Tax=CG_Hydro_01
hypothetical protein
cg_0.2_sub10_scaffold_255_c_29
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28666..29310)
DNA (645bp) protein (215aa)
Flagellin domain protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M0H1_GEODF rbh
flagellin domain-containing protein Tax=CG_Hydro_01
flagellin domain-containing protein
cg_0.2_sub10_scaffold_255_c_30
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29307..29786)
DNA (480bp) protein (160aa)
Flagellin domain protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WKA4_GEOS8
flagellin domain-containing protein Tax=CG_Hydro_01
flagellin domain-containing protein
Displaying 30 items

View Taxonomy