ggKbase home page

cg_0.2_sub10_scaffold_732_c_13

Organism: CG1_02_SUB10_Gracilibacteria_GN02_38_174_curated

near complete RP 47 / 55 MC: 3 BSCG 44 / 51 ASCG 9 / 38 MC: 3
Location: comp(5814..6272)

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70; K03086 RNA polymerase primary sigma factor Tax=CG_GN02-01 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 152.0
  • Bit_score: 295
  • Evalue 5.30e-77
cth:Cthe_0895 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor id=124054 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 152.0
  • Bit_score: 293
  • Evalue 1.40e-76
  • rbh
sigA; RNA polymerase major sigma-43 factor (sigma-A) similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 146.0
  • Bit_score: 128
  • Evalue 1.70e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_GN02-01 → Gracilibacteria → Bacteria

Sequences

DNA sequence
Length: 459
TTGCTCGAAGGACTTTCTGAAAATCTTCAACTCCTTATAAAAAAAGGAAAGGTGGAAGGGAAAATCACCTATGATGAGCTTCTTGCTGCTATGCCCCATGCAGAAGATGATGTCGATAAGCTCGATGAAATCTATACACGTCTTATGAAACTTAATATCGAAATTGTCGACAGTTTCGATAAAGATGAAATATTTAAACCAGGTCATACGAGTGAAGAAAAAGCTCAAGAAATAGATCTTTCTGATATTTCAGATGATTCCATTAGAATGTATCTAAATGAGATTGGACGATTCCATCTCATCGATGCTGAAGAAGAGGTACGTCTCGGTCGTCTCATCAAGAAAGGTTCACAGGACGCTCGAAAGAAACTTGCCGAAGCGAATCTCCGTCTCGTTGTAAGTATTGCAAAAAAATATATGGGGCGTGGTCTCGGACTTCTTGACCTTATTCAAGAATGA
PROTEIN sequence
Length: 153
LLEGLSENLQLLIKKGKVEGKITYDELLAAMPHAEDDVDKLDEIYTRLMKLNIEIVDSFDKDEIFKPGHTSEEKAQEIDLSDISDDSIRMYLNEIGRFHLIDAEEEVRLGRLIKKGSQDARKKLAEANLRLVVSIAKKYMGRGLGLLDLIQE*