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cg_0.2_sub10_scaffold_732_c

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_732_c_1
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

240..479
DNA (240bp) protein (80aa)
Tax=CG_GN02-01
cg_0.2_sub10_scaffold_732_c_2
unknown

Not on your lists

624..773
DNA (150bp) protein (50aa)

This feature has no annotations

cg_0.2_sub10_scaffold_732_c_3
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

783..1028
DNA (246bp) protein (82aa)
Tax=CG_GN02-01
cg_0.2_sub10_scaffold_732_c_4
unknown

Not on your lists

1167..1268
DNA (102bp) protein (34aa)

This feature has no annotations

cg_0.2_sub10_scaffold_732_c_5
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

1386..2330
DNA (945bp) protein (315aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=CG_GN02-01
valS; valyl-tRNA synthase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G4U2_9BACT
Suspect SCG annotation. See neighboring gene [cg_0.2_sub10_scaffold_732_c_6].
cg_0.2_sub10_scaffold_732_c_6
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists


2451..3842
DNA (1392bp) protein (464aa)
valS; Valyl-tRNA synthetase (EC:6.1.1.9) Tax=CG_GN02-01
cow:Calow_1270 valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=124053 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
valS; valyl-tRNA synthase (EC:6.1.1.9)
cg_0.2_sub10_scaffold_732_c_7
unknown

Not on your lists

4210..4347
DNA (138bp) protein (46aa)

This feature has no annotations

cg_0.2_sub10_scaffold_732_c_8
unknown

Not on your lists

4360..4461
DNA (102bp) protein (34aa)

This feature has no annotations

cg_0.2_sub10_scaffold_732_c_9
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

4462..4671
DNA (210bp) protein (70aa)
Tax=CG_GN02-01
cg_0.2_sub10_scaffold_732_c_10
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(4839..4979)
DNA (141bp) protein (47aa)
hypothetical protein Tax=CG_GN02-01
hypothetical protein id=124043 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg_0.2_sub10_scaffold_732_c_11
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(4989..5192)
DNA (204bp) protein (68aa)
hypothetical protein Tax=CG_GN02-01
hypothetical protein id=124043 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg_0.2_sub10_scaffold_732_c_12
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(5295..5672)
DNA (378bp) protein (126aa)
cth:Cthe_0895 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor id=124054 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
RNA polymerase sigma factor Tax=CG_GN02-01
rpoD1; RNA polymerase sigma factor RpoD
cg_0.2_sub10_scaffold_732_c_13
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(5814..6272)
DNA (459bp) protein (153aa)
RpoD subfamily RNA polymerase sigma-70; K03086 RNA polymerase primary sigma factor Tax=CG_GN02-01
cth:Cthe_0895 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor id=124054 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
sigA; RNA polymerase major sigma-43 factor (sigma-A)
cg_0.2_sub10_scaffold_732_c_14
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(6390..6740)
DNA (351bp) protein (117aa)
cth:Cthe_0895 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=CG_GN02-01
cth:Cthe_0895 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor id=124054 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg_0.2_sub10_scaffold_732_c_15
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(6774..7364)
DNA (591bp) protein (197aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=CG_GN02-01
DNA primase; K02316 DNA primase [EC:2.7.7.-] id=124052 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg_0.2_sub10_scaffold_732_c_16
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(7389..7538)
DNA (150bp) protein (50aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=ACD78
DNA primase; K02316 DNA primase [EC:2.7.7.-] id=124052 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
cg_0.2_sub10_scaffold_732_c_17
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(7824..8456)
DNA (633bp) protein (211aa)
dnaG; DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] Tax=CG_GN02-01
DNA primase; K02316 DNA primase [EC:2.7.7.-] id=124052 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
dnaG; DNA primase (EC:2.7.7.-)
cg_0.2_sub10_scaffold_732_c_18
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(8685..9155)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YX64_9BACT rbh
Uncharacterized protein Tax=CG_GN02-01
cg_0.2_sub10_scaffold_732_c_19
unknown

Not on your lists

comp(9281..9523)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NW92_9DELT Tax=ACD78
Putative uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NW92_9DELT id=124048 bin=ACD78 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg_0.2_sub10_scaffold_732_c_20
unknown

Not on your lists

comp(9677..10045)
DNA (369bp) protein (123aa)
GTP-binding protein Era n=1 Tax=Oribacterium sinus F0268 RepID=C2L1J1_9FIRM Tax=ACD78
putative GTP-binding protein
cg_0.2_sub10_scaffold_732_c_21
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(10046..10420)
DNA (375bp) protein (125aa)
GTP-binding protein Era n=1 Tax=Oribacterium sinus F0268 RepID=C2L1J1_9FIRM id=124050 bin=ACD78 species=Oribacterium sinus genus=Oribacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
GTP-binding protein Era; K03595 GTP-binding protein Era Tax=CG_GN02-01
GTP-binding protein Era
cg_0.2_sub10_scaffold_732_c_22
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(10531..11076)
DNA (546bp) protein (182aa)
tapB; type IV pilus assembly protein TapB; K02652 type IV pilus assembly protein PilB Tax=CG_GN02-01
aae:aq_1971 tapB; type IV pilus assembly protein TapB; K02652 type IV pilus assembly protein PilB id=69042 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
tapB; type IV pilus assembly protein TapB
cg_0.2_sub10_scaffold_732_c_23
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(11164..11700)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BC03_9BACT
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=CG_GN02-01
type II secretion system protein E
cg_0.2_sub10_scaffold_732_c_24
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

12049..13026
DNA (978bp) protein (326aa)
adventurous gliding motility protein AgmT Tax=CG_GN02-01
agmT; adventurous gliding motility protein AgmT; K07082 id=68832 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
hypothetical protein
cg_0.2_sub10_scaffold_732_c_25
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(13346..13792)
DNA (447bp) protein (149aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4); K01362 [EC:3.4.21.-] Tax=CG_GN02-01
Protease Do n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G4P0_9BACT
protease Do
cg_0.2_sub10_scaffold_732_c_26
unknown

Not on your lists

comp(13916..14047)
DNA (132bp) protein (44aa)

This feature has no annotations

cg_0.2_sub10_scaffold_732_c_27
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(14120..14527)
DNA (408bp) protein (136aa)
Protease Do n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G4P0_9BACT rbh
Trypsin
Protease Do Tax=CG_GN02-01
cg_0.2_sub10_scaffold_732_c_28
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

14713..15009
DNA (297bp) protein (99aa)
hypothetical protein Tax=CG_GN02-01
hypothetical protein id=124187 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
cg_0.2_sub10_scaffold_732_c_29
unknown

Not on your lists

15537..15641
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 29 items

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