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cg_0.2_sub10_scaffold_413_c

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Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_413_c_1
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

1..453
DNA (453bp) protein (151aa)
Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_413_c_trna_1
unknown

Not on your lists

364..445
DNA (82bp)
transferRNA
cg_0.2_sub10_scaffold_413_c_2
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

453..1070
DNA (618bp) protein (206aa)
Adenylate cyclase n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EF99_9EURY rbh
Adenylate cyclase Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_413_c_3
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(1071..1334)
DNA (264bp) protein (88aa)
Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_413_c_4
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(1374..2840)
DNA (1467bp) protein (489aa)
thymidine phosphorylase (EC:2.4.2.4); K00758 thymidine phosphorylase [EC:2.4.2.4] Tax=CG_Pacearch_06
thymidine phosphorylase (EC:2.4.2.4); K00758 thymidine phosphorylase [EC:2.4.2.4] id=5802766 bin=PER_GWA2_38_35 species=PER_GWA2_38_35 genus=PER_GWA2_38_35 taxon_order=PER_GWA2_38_35 taxon_class=PER_GWA2_38_35 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
thymidine phosphorylase (EC:2.4.2.4)
cg_0.2_sub10_scaffold_413_c_5
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(2872..3903)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CCA3F
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein
cg_0.2_sub10_scaffold_413_c_6
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

3980..4633
DNA (654bp) protein (218aa)
id=5048829 Tax=CG_Pacearch_06
id=5048829 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cg_0.2_sub10_scaffold_413_c_7
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


4757..5695
DNA (939bp) protein (313aa)
50S ribosomal protein L3 n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXT2_FERPA id=5103252 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rpl3p; 50S ribosomal protein L3P; K02906 large subunit ribosomal protein L3 Tax=CG_Pacearch_06
50S ribosomal protein L3
cg_0.2_sub10_scaffold_413_c_8
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


5695..6477
DNA (783bp) protein (261aa)
50S ribosomal protein L4 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL4_NANEQ id=5103253 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rpl4lp; 50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e Tax=CG_Pacearch_06
50S ribosomal protein L4
cg_0.2_sub10_scaffold_413_c_9
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

6474..7112
DNA (639bp) protein (213aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFA4_9EURY rbh
Exonuclease RNase T and DNA polymerase III Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_413_c_10
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


7109..7351
DNA (243bp) protein (81aa)
50S ribosomal protein L23P n=3 Tax=Thermococcus RepID=RL23_PYRKO id=5103254 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 Tax=CG_Pacearch_06
50S ribosomal protein L23P
cg_0.2_sub10_scaffold_413_c_11
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


7351..8049
DNA (699bp) protein (233aa)
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=CG_Pacearch_06
50S ribosomal protein L2 id=5800061 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L2
cg_0.2_sub10_scaffold_413_c_12
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


8049..8465
DNA (417bp) protein (139aa)
30S ribosomal protein S19 n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=RS19_METBF rbh
rps19p; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=CG_Pacearch_06
SSU ribosomal protein S15e (S19p)
cg_0.2_sub10_scaffold_413_c_13
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

8465..9001
DNA (537bp) protein (179aa)
Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_413_c_14
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


9001..9702
DNA (702bp) protein (234aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GVV9_9ZZZZ
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=CG_Pacearch_06
30S ribosomal protein S3
cg_0.2_sub10_scaffold_413_c_15
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

9699..9896
DNA (198bp) protein (66aa)
Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_413_c_16
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

9899..10198
DNA (300bp) protein (100aa)
Protein translation factor SUI1 homolog n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VQK7_9EURY rbh
translation initiation factor Sui1; K03113 translation initiation factor 1 Tax=CG_Pacearch_06
translation initiation factor Sui1
cg_0.2_sub10_scaffold_413_c_17
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


10225..10548
DNA (324bp) protein (108aa)
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=CG_Pacearch_06
30S ribosomal protein S17P id=5800054 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S17
cg_0.2_sub10_scaffold_413_c_18
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


10529..10930
DNA (402bp) protein (134aa)
50S ribosomal protein L14 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL14_NANEQ rbh
rpl14p; 50S ribosomal protein L14P; K02874 large subunit ribosomal protein L14 Tax=CG_Pacearch_06
rpl14p; 50S ribosomal protein L14P
cg_0.2_sub10_scaffold_413_c_19
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


10927..11346
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372D201
rpl24p; 50S ribosomal protein L24P; K02895 large subunit ribosomal protein L24 Tax=CG_Pacearch_06
50S ribosomal protein L24P
cg_0.2_sub10_scaffold_413_c_20
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


11327..11944
DNA (618bp) protein (206aa)
30S ribosomal protein S4e n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=RS4E_METTH rbh
30S ribosomal protein S4; K02987 small subunit ribosomal protein S4e Tax=CG_Pacearch_06
30S ribosomal protein S4
cg_0.2_sub10_scaffold_413_c_21
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


11941..12486
DNA (546bp) protein (182aa)
50S ribosomal protein L5 n=1 Tax=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) RepID=D3E2F5_METRM rbh
rpl5p; ribosomal protein L5P Rpl5p; K02931 large subunit ribosomal protein L5 Tax=CG_Pacearch_06
rpl5p; 50S ribosomal protein L5
cg_0.2_sub10_scaffold_413_c_22
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

12489..12719
DNA (231bp) protein (77aa)
hypothetical protein; K02954 small subunit ribosomal protein S14 Tax=CG_Pacearch_06
hypothetical protein; K02954 small subunit ribosomal protein S14 id=5041773 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
SSU ribosomal protein S14P
cg_0.2_sub10_scaffold_413_c_23
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


12728..13102
DNA (375bp) protein (125aa)
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=CG_Pacearch_06
30S ribosomal protein S8, small subunit ribosomal protein S8
rps8p; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=5241366 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
cg_0.2_sub10_scaffold_413_c_24
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


13102..13644
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHC4_THEBM rbh
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=CG_Pacearch_06
50S ribosomal protein L6
cg_0.2_sub10_scaffold_413_c_25
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

13644..13991
DNA (348bp) protein (116aa)
Ribosomal protein L32e n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EG39_9EURY rbh
Ribosomal protein L32e Tax=CG_Pacearch_06
cg_0.2_sub10_scaffold_413_c_26
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

13988..14407
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00036CDE30
50S ribosomal protein L19e; K02885 large subunit ribosomal protein L19e Tax=CG_Pacearch_06
50S ribosomal protein L19e
cg_0.2_sub10_scaffold_413_c_27
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


14400..14879
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003679C1A
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=CG_Pacearch_06
50S ribosomal protein L18
cg_0.2_sub10_scaffold_413_c_28
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


14879..15724
DNA (846bp) protein (282aa)
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 Tax=CG_Pacearch_06
rps5p; 30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 id=5041779 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S5
cg_0.2_sub10_scaffold_413_c_29
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists


15726..16139
DNA (414bp) protein (138aa)
50S ribosomal protein L30P n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXV3_FERPA rbh
ribosomal protein L30P; K02907 large subunit ribosomal protein L30 Tax=CG_Pacearch_06
ribosomal protein L30P
Displaying items 1-30 of 41 in total

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