ggKbase home page

cg_0.2_sub10_scaffold_565_c

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_565_c_1
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

comp(739..1209)
DNA (471bp) protein (157aa)
Marine sediment metagenome DNA, contig: S01H1_S11248 Tax=Altiarchaeum hamiconexum
cg_0.2_sub10_scaffold_565_c_2
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

1537..2010
DNA (474bp) protein (158aa)
acetolactate synthase small subunit; K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6] Tax=Altiarchaeum hamiconexum
Acetolactate synthase, small subunit n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BCP3_METIK rbh
acetolactate synthase small subunit
cg_0.2_sub10_scaffold_565_c_3
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

2010..2375
DNA (366bp) protein (122aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=Altiarchaeum hamiconexum
DNA ligase D, 3'-phosphoesterase domain protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KNK4_ARCVS rbh
DNA ligase D
cg_0.2_sub10_scaffold_565_c_4
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

2430..3404
DNA (975bp) protein (325aa)
Wyosine base formation domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWM7_METFV rbh
wyosine base formation domain-containing protein Tax=Altiarchaeum hamiconexum
wyosine base formation domain-containing protein
cg_0.2_sub10_scaffold_565_c_5
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists


3511..4488
DNA (978bp) protein (326aa)
50S ribosomal protein L3 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZB8_METFV rbh
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=Altiarchaeum hamiconexum
50S ribosomal protein L3
cg_0.2_sub10_scaffold_565_c_6
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

4644..5318
DNA (675bp) protein (225aa)
Ribosomal protein L4/L1e n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIC7_9EURY rbh
rpl4LP; 50S ribosomal protein L4P Tax=Altiarchaeum hamiconexum
rpl4LP; 50S ribosomal protein L4P
cg_0.2_sub10_scaffold_565_c_7
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists


5325..5573
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Sulfolobales archaeon Acd1 RepID=UPI00035F9C84
50S ribosomal protein L23Ae (L23p); K02892 large subunit ribosomal protein L23 Tax=Altiarchaeum hamiconexum
50S ribosomal protein L23P
cg_0.2_sub10_scaffold_565_c_8
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists


5629..6348
DNA (720bp) protein (240aa)
50S ribosomal protein L2 n=1 Tax=uncultured Acidilobus sp. CIS RepID=V4JWP4_9CREN rbh
50S ribosomal protein L2 Tax=Altiarchaeum hamiconexum
50S ribosomal protein L2
cg_0.2_sub10_scaffold_565_c_9
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists


6400..6819
DNA (420bp) protein (140aa)
30S ribosomal protein S19 n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=RS19_KORCO rbh
rps19p; 30S ribosomal protein S19P; K02965 small subunit ribosomal protein S19 Tax=Altiarchaeum hamiconexum
rps19p; 30S ribosomal protein S19
cg_0.2_sub10_scaffold_565_c_10
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists


6831..7367
DNA (537bp) protein (179aa)
60S ribosomal protein L17-2 n=2 Tax=Hordeum vulgare RepID=RL172_HORVU rbh
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=Altiarchaeum hamiconexum
50S ribosomal protein L22
cg_0.2_sub10_scaffold_565_c_11
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists


7370..8056
DNA (687bp) protein (229aa)
30S ribosomal protein S3 n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1KXU7_9EURY rbh
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=Altiarchaeum hamiconexum
30S ribosomal protein S3
cg_0.2_sub10_scaffold_565_c_12
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists


8093..8302
DNA (210bp) protein (70aa)
50S ribosomal protein L29P n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z0S7_METPS rbh
rpl29p; 50S ribosomal protein L29P; K02904 large subunit ribosomal protein L29 Tax=Altiarchaeum hamiconexum
rpl29p; 50S ribosomal protein L29P
cg_0.2_sub10_scaffold_565_c_13
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

8309..8656
DNA (348bp) protein (116aa)
Translation initiation factor SUI1 n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHU1_9EURY rbh
Protein translation factor SUI1 like protein; K03113 translation initiation factor 1 Tax=Altiarchaeum hamiconexum
Protein translation factor SUI1 like protein
cg_0.2_sub10_scaffold_565_c_14
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

8730..9017
DNA (288bp) protein (96aa)
ribonuclease P protein component 1; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] Tax=Altiarchaeum hamiconexum
Ribonuclease P protein component 1 n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6T1N1_9EURY rbh
ribonuclease P protein component 1
cg_0.2_sub10_scaffold_565_c_15
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists


9120..9377
DNA (258bp) protein (86aa)
30S ribosomal protein S17P n=1 Tax=Ferroplasma sp. Type II RepID=T0M218_9EURY rbh
30S ribosomal protein S17P Tax=Altiarchaeum hamiconexum
30S ribosomal protein S17P
cg_0.2_sub10_scaffold_565_c_trna_2
unknown

Not on your lists

comp(9733..9806)
DNA (74bp)
transferRNA
cg_0.2_sub10_scaffold_565_c_16
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

9956..10297
DNA (342bp) protein (114aa)
Tax=Altiarchaeum hamiconexum
cg_0.2_sub10_scaffold_565_c_17
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

comp(10292..11335)
DNA (1044bp) protein (348aa)
Peptidase M24 n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B450_ACIHW rbh
peptidase M24 Tax=Altiarchaeum hamiconexum
peptidase M24
cg_0.2_sub10_scaffold_565_c_18
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

11523..12629
DNA (1107bp) protein (369aa)
isocitrate dehydrogenase (NADP) (EC:1.1.1.41) Tax=Altiarchaeum hamiconexum
isocitrate dehydrogenase (NADP) (EC:1.1.1.41)
Isocitrate dehydrogenase (NADP) n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ESB2_9BACT
cg_0.2_sub10_scaffold_565_c_19
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

comp(13187..13570)
DNA (384bp) protein (128aa)
resolvase, holliday junction-type; K03552 holliday junction resolvase, archaea type Tax=Altiarchaeum hamiconexum
resolvase, holliday junction-type
cg_0.2_sub10_scaffold_565_c_20
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

comp(13588..14085)
DNA (498bp) protein (166aa)
Amino acid-binding ACT domain protein n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P6G9_METFA rbh
amino acid-binding ACT protein Tax=Altiarchaeum hamiconexum
amino acid-binding ACT domain protein
cg_0.2_sub10_scaffold_565_c_trna_1
unknown

Not on your lists

14203..14286
DNA (84bp)
transferRNA
cg_0.2_sub10_scaffold_565_c_21
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

14536..15750
DNA (1215bp) protein (405aa)
TIGR00300 family protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6B4_METCZ rbh
hypothetical protein Tax=Altiarchaeum hamiconexum
hypothetical protein
cg_0.2_sub10_scaffold_565_c_22
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

15840..16223
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S2Z9_DESTD
hypothetical protein Tax=Altiarchaeum hamiconexum
hypothetical protein
cg_0.2_sub10_scaffold_565_c_23

Not on your lists

17190..17867
DNA (678bp) protein (226aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG11395.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
Putative uncharacterized protein id=3967417 bin=GWF2_Nitrospirae_44_13 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
HhH-GPD family protein
Displaying 25 items

View Taxonomy