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cg_0.2_sub10_scaffold_418_c

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_418_c_1
CG_CPR12_01, CG_CPR12, Bacteria

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1..237
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7L4_9BACT
hypothetical protein Tax=CG_CPR12_01
hypothetical protein
cg_0.2_sub10_scaffold_418_c_2
CG_CPR12_01, CG_CPR12, Bacteria

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310..1374
DNA (1065bp) protein (355aa)
mechanosensitive ion channel protein MscS Tax=CG_CPR12_01
mechanosensitive ion channel protein MscS id=5091517 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
mechanosensitive ion channel protein MscS
cg_0.2_sub10_scaffold_418_c_3
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

1376..1714
DNA (339bp) protein (113aa)
bifunctional riboflavin kinase/FMN adenylyltransferase; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=CG_CPR12_01
riboflavin biosynthesis protein RibF (EC:2.7.7.2 2.7.1.26)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FE23_9BACT
cg_0.2_sub10_scaffold_418_c_4
CG_CPR12_01, CG_CPR12, Bacteria

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1947..2216
DNA (270bp) protein (90aa)
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=CG_CPR12_01
riboflavin synthase subunit alpha (EC:2.5.1.9)
riboflavin synthase subunit alpha n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B477D0
cg_0.2_sub10_scaffold_418_c_5
CG_CPR12_01, CG_CPR12, Bacteria

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2284..2739
DNA (456bp) protein (152aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Listeria grayi DSM 20601 RepID=C2C0R5_LISGR id=136460 bin=ACD8 species=Listeria grayi genus=Listeria taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
ribH; 6,7-dimethyl-8-ribityllumazine synthase RibH Tax=CG_CPR12_01
ribH; 6,7-dimethyl-8-ribityllumazine synthase
cg_0.2_sub10_scaffold_418_c_6
CG_CPR12_01, CG_CPR12, Bacteria

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2747..3487
DNA (741bp) protein (247aa)
ABC transporter; K09687 antibiotic transport system ATP-binding protein Tax=CG_CPR12_01
ABC transporter related protein; K09687 antibiotic transport system ATP-binding protein id=68474 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
ABC transporter
cg_0.2_sub10_scaffold_418_c_7
CG_CPR12_01, CG_CPR12, Bacteria

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3505..4275
DNA (771bp) protein (257aa)
ABC transporter, inner membrane subunit n=1 Tax=Reinekea blandensis MED297 RepID=A4BH89_9GAMM id=68473 bin=ACD48 species=Reinekea blandensis genus=Reinekea taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
inner membrane transport permease Tax=CG_CPR12_01
inner membrane transport permease
cg_0.2_sub10_scaffold_418_c_8
CG_CPR12_01, CG_CPR12, Bacteria

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comp(4420..5163)
DNA (744bp) protein (248aa)
Tax=CG_CPR12_01
cg_0.2_sub10_scaffold_418_c_9
unknown

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comp(5386..5673)
DNA (288bp) protein (96aa)

This feature has no annotations

cg_0.2_sub10_scaffold_418_c_trna_1
unknown

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5469..5540
DNA (72bp)
transferRNA
cg_0.2_sub10_scaffold_418_c_10
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

5847..6401
DNA (555bp) protein (185aa)
transposase Tax=CG_CPR12_01
integrase catalytic subunit id=5802045 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
transposase
cg_0.2_sub10_scaffold_418_c_11
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

6812..9514
DNA (2703bp) protein (901aa)
chromosome segregation protein SMC; K03529 chromosome segregation protein Tax=CG_CPR12_01
Chromosome partition protein Smc id=1899464 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Chromosome partition protein smc
cg_0.2_sub10_scaffold_418_c_trna_2
unknown

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9572..9643
DNA (72bp)
transferRNA
cg_0.2_sub10_scaffold_418_c_trna_3
unknown

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9654..9725
DNA (72bp)
transferRNA
cg_0.2_sub10_scaffold_418_c_trna_4
unknown

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9775..9845
DNA (71bp)
transferRNA
cg_0.2_sub10_scaffold_418_c_12
CG_CPR13_01, CG_CPR13, Bacteria

Not on your lists

comp(9837..10058)
DNA (222bp) protein (74aa)
Recombinase id=1899217 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
recombinase Tax=CG_CPR13_01
cg_0.2_sub10_scaffold_418_c_13
CG_CPR13_01, CG_CPR13, Bacteria

Not on your lists

comp(10152..10535)
DNA (384bp) protein (128aa)
recombinase Tax=CG_CPR13_01
Recombinase id=1899217 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
cg_0.2_sub10_scaffold_418_c_14
RIFOXYD2_FULL_RIF_OD1_10_43_10_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

10669..10821
DNA (153bp) protein (51aa)
hypothetical protein
hypothetical protein Tax=RIFOXYD2_FULL_RIF_OD1_10_43_10_curated
hypothetical protein id=95890 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
cg_0.2_sub10_scaffold_418_c_15
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(10979..12250)
DNA (1272bp) protein (424aa)
DEAD/DEAH box helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] Tax=CG_CPR12_01
Uncharacterized protein (Fragment) id=1251238 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
ATP-dependent RNA helicase RhlE
cg_0.2_sub10_scaffold_418_c_16
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

12448..13410
DNA (963bp) protein (321aa)
Zn-dependent hydrolase Tax=CG_CPR12_01
Zn-dependent hydrolase id=1985135 bin=GWE2_RBX1_39_32 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Zn-dependent hydrolase
cg_0.2_sub10_scaffold_418_c_17
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

13545..14174
DNA (630bp) protein (210aa)
leucine-rich repeat-containing protein Tax=CG_CPR12_01
Leucine-rich repeat-containing protein 40 id=1899315 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
cg_0.2_sub10_scaffold_418_c_18
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

14313..15761
DNA (1449bp) protein (483aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=CG_CPR12_01
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=2 Tax=Lactobacillus salivarius RepID=Q1WU58_LACS1
cg_0.2_sub10_scaffold_418_c_19
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

16279..16527
DNA (249bp) protein (83aa)
Type I restriction-modification system, M subunit (Fragment) n=1 Tax=sediment metagenome RepID=D9PM75_9ZZZZ
type I restriction system adenine methylase HsdM Tax=CG_CPR12_01
type I restriction-modification system methyltransferase subunit
cg_0.2_sub10_scaffold_418_c_20
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

16530..17195
DNA (666bp) protein (222aa)
Tax=CG_CPR12_01
cg_0.2_sub10_scaffold_418_c_21
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

17192..17311
DNA (120bp) protein (40aa)
Tax=CG_CPR12_01
cg_0.2_sub10_scaffold_418_c_22
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

17454..18239
DNA (786bp) protein (262aa)
Exodeoxyribonuclease III n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MAB5_9EURY rbh
exodeoxyribonuclease III Tax=CG_CPR12_01
exodeoxyribonuclease III
cg_0.2_sub10_scaffold_418_c_23
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

18316..18675
DNA (360bp) protein (120aa)
Tax=CG_CPR12_01
cg_0.2_sub10_scaffold_418_c_24
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

18784..19170
DNA (387bp) protein (129aa)
Tax=CG_CPR12_01
cg_0.2_sub10_scaffold_418_c_25
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

19180..19437
DNA (258bp) protein (86aa)
methylated-DNA/protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=CG_Wolfe_01
methylated-DNA-[protein]-cysteine S-methyltransferase (EC:2.1.1.63)
Methylated-DNA--protein-cysteine methyltransferase (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFI0_CLOAI id=16382 bin=ACD1 species=Candidatus Cloacimonas acidaminovorans genus=Candidatus Cloacimonas taxon_order=unknown taxon_class=unknown phylum=Cloacimonetes tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
cg_0.2_sub10_scaffold_418_c_26
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

19434..20087
DNA (654bp) protein (218aa)
hypothetical protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=CG_CPR12_01
Thermostable uracil-DNA glycosylase id=1947702 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
Displaying items 1-30 of 55 in total

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