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cg_0.2_sub10_scaffold_299_c

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_299_c_1
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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82..1824
DNA (1743bp) protein (581aa)
Hypothetical membrane protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YI27_THEYD
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:ACI21820.1}; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii
cg_0.2_sub10_scaffold_299_c_2
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1855..2016
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NIF0_DESAR
hypothetical protein Tax=CG_Delta_05
hypothetical protein
cg_0.2_sub10_scaffold_299_c_3
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

2114..2392
DNA (279bp) protein (93aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
cg_0.2_sub10_scaffold_299_c_4
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

2392..3141
DNA (750bp) protein (250aa)
hypothetical protein Tax=RBG_16_Nitrospirae_43_8_curated
Integral membrane protein, YjbE family id=4127707 bin=GWF2_Nitrospirae_44_13 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_299_c_5
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

3169..3972
DNA (804bp) protein (268aa)
cytidylate kinase Tax=RBG_16_Nitrospirae_43_8_curated
Cytidylate kinase id=4127708 bin=GWF2_Nitrospirae_44_13 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cytidylate kinase
cg_0.2_sub10_scaffold_299_c_6
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(4029..4598)
DNA (570bp) protein (190aa)
CDP-alcohol phosphatidyltransferase family protein; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=GWF2_Nitrospirae_44_13_curated
CDP-alcohol phosphatidyltransferase family protein id=4127709 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
CDP-alcohol phosphatidyltransferase family protein
cg_0.2_sub10_scaffold_299_c_7
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(4595..5725)
DNA (1131bp) protein (377aa)
hypothetical protein; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=GWF2_Nitrospirae_44_13_curated
Conserved protein id=4127710 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_299_c_trna_2
unknown

Not on your lists

comp(5744..5817)
DNA (74bp)
transferRNA
cg_0.2_sub10_scaffold_299_c_8
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(5859..6260)
DNA (402bp) protein (134aa)
transcription regulator protein Tax=RBG_16_Nitrospirae_43_8_curated
Transcription regulator protein id=4127711 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
transcription regulator protein
cg_0.2_sub10_scaffold_299_c_9
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(6264..6536)
DNA (273bp) protein (91aa)
Integration host factor subunit alpha id=4127712 bin=GWF2_Nitrospirae_44_13 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
integration host factor subunit alpha; K04764 integration host factor subunit alpha Tax=GWF2_Nitrospirae_44_13_curated
integration host factor subunit alpha
cg_0.2_sub10_scaffold_299_c_10
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

6682..8274
DNA (1593bp) protein (531aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-); K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-] Tax=RBG_16_Nitrospirae_43_8_curated
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase id=4127713 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_299_c_11
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

8436..8822
DNA (387bp) protein (129aa)
Putative uncharacterized protein id=4127714 bin=GWF2_Nitrospirae_44_13 species=Kitasatospora setae genus=Kitasatospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein; K08972 putative membrane protein Tax=GWF2_Nitrospirae_44_13_curated
membrane protein
cg_0.2_sub10_scaffold_299_c_12
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

8822..10633
DNA (1812bp) protein (604aa)
Probable potassium transport system protein kup id=4127715 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
potassium uptake protein Kup; K03549 KUP system potassium uptake protein Tax=GWF2_Nitrospirae_44_13_curated
potassium uptake protein Kup
cg_0.2_sub10_scaffold_299_c_13
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

10720..10950
DNA (231bp) protein (77aa)
Putative uncharacterized protein id=4127716 bin=GWF2_Nitrospirae_44_13 species=Methanoregula boonei genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein Tax=GWF2_Nitrospirae_44_13_curated
hypothetical protein
cg_0.2_sub10_scaffold_299_c_14
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(10947..12395)
DNA (1449bp) protein (483aa)
cobB; cobyrinic Acid a,c-diamide synthase (EC:6.3.1.-); K02224 cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] Tax=CG_Nitrosp_01
cobB; cobyrinic Acid a,c-diamide synthase (EC:6.3.1.-)
Cobyrinic acid A,C-diamide synthase id=4127717 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_299_c_15
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(12462..13043)
DNA (582bp) protein (194aa)
hypothetical protein Tax=CG_Nitrosp_01
hypothetical protein id=16793590 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
hypothetical protein
cg_0.2_sub10_scaffold_299_c_16
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(13040..13705)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YCK6_9BACT
hypothetical protein Tax=CG_Nitrosp_01
hypothetical protein
cg_0.2_sub10_scaffold_299_c_17
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(13922..14419)
DNA (498bp) protein (166aa)
hypothetical protein; K09767 hypothetical protein Tax=CG_Nitrosp_01
UPF0234 protein LW3_0090 id=4674039 bin=GWF2_Nitrospirae_44_13 species=uncultured Nitrospirae bacterium MY3-5B genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_299_c_18
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(14642..18757)
DNA (4116bp) protein (1372aa)
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=CG_Nitrosp_01
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' id=4674040 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_299_c_19
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(18759..22700)
DNA (3942bp) protein (1314aa)
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=CG_Nitrosp_01
rpoB; DNA-directed RNA polymerase subuit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta id=4674041 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_299_c_20
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists


comp(22805..23188)
DNA (384bp) protein (128aa)
rplL; ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=CG_Nitrosp_01
50S ribosomal protein L7/L12 id=4674042 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
rplL; 50S ribosomal protein L7/L12
cg_0.2_sub10_scaffold_299_c_21
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists


comp(23258..23716)
DNA (459bp) protein (153aa)
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=CG_Nitrosp_01
50S ribosomal protein L10 id=4674043 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
50S ribosomal protein L10
cg_0.2_sub10_scaffold_299_c_22
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists


comp(23994..24686)
DNA (693bp) protein (231aa)
rplA; ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=CG_Nitrosp_01
50S ribosomal protein L1 id=4674044 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
rplA; 50S ribosomal protein L1
cg_0.2_sub10_scaffold_299_c_23
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists


comp(24779..25210)
DNA (432bp) protein (144aa)
rplK; ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=CG_Nitrosp_01
50S ribosomal protein L11 id=4674074 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
rplK; 50S ribosomal protein L11
cg_0.2_sub10_scaffold_299_c_24
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(25261..25785)
DNA (525bp) protein (175aa)
nusG; transcription termination/antitermination factor NusG; K02601 transcriptional antiterminator NusG Tax=CG_Nitrosp_01
Transcription antitermination protein nusG id=4674076 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
nusG; transcription termination/antitermination factor NusG
cg_0.2_sub10_scaffold_299_c_25
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(25788..25973)
DNA (186bp) protein (62aa)
secE; preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE Tax=CG_Nitrosp_01
Preprotein translocase, SecE subunit id=4674078 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
secE; preprotein translocase subunit SecE
cg_0.2_sub10_scaffold_299_c_trna_1
unknown

Not on your lists

comp(26054..26127)
DNA (74bp)
transferRNA
cg_0.2_sub10_scaffold_299_c_26
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(26370..26672)
DNA (303bp) protein (101aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXE6_DESAC
tuf2; elongation factor Tu Tax=RBG_16_Nitrospirae_43_8_curated
Displaying 28 items

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