ggKbase home page

cg_0.2_sub10_scaffold_134_c

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_134_c_1
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

248..946
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MFG0_PSEPS
Uncharacterized protein {ECO:0000313|EMBL:ELS25200.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseu
hypothetical protein
cg_0.2_sub10_scaffold_134_c_2
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

1173..1454
DNA (282bp) protein (94aa)
hypothetical protein Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
Putative uncharacterized protein id=3500022 bin=GWC2_Methylomirabilis_70_16 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
cg_0.2_sub10_scaffold_134_c_3
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1480..1707
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1E9_ROSS1
hypothetical protein Tax=CG_Desulfob_01
hypothetical protein
cg_0.2_sub10_scaffold_134_c_4
unknown

Not on your lists

2087..2233
DNA (147bp) protein (49aa)

This feature has no annotations

cg_0.2_sub10_scaffold_134_c_5
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

2480..3094
DNA (615bp) protein (205aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=CG_Nitrosp_01
Formate dehydrogenase (Quinone-dependent) catalytic subunit id=2170747 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
formate dehydrogenase subunit alpha
cg_0.2_sub10_scaffold_134_c_6
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

3143..5686
DNA (2544bp) protein (848aa)
formate dehydrogenase, alpha subunit, selenocysteine-containing (EC:1.2.1.2); K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=CG_Nitrosp_01
formate dehydrogenase subuit alpha, selenocysteine-containing (EC:1.2.1.2)
Formate dehydrogenase, alpha subunit, selenocysteine-containing id=2170748 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
cg_0.2_sub10_scaffold_134_c_7
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

5698..6450
DNA (753bp) protein (251aa)
4Fe-4S ferredoxin Tax=CG_Nitrosp_01
Formate dehydrogenase (Quinone-dependent) iron-sulfur subunit id=2170773 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
4Fe-4S ferredoxin
cg_0.2_sub10_scaffold_134_c_8
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

6453..7064
DNA (612bp) protein (204aa)
formate dehydrogenase subunit gamma; K00127 formate dehydrogenase, gamma subunit Tax=CG_Nitrosp_01
Formate dehydrogenase, cytochrome b subunit id=2170774 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
formate dehydrogenase subunit gamma
cg_0.2_sub10_scaffold_134_c_9
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

7196..9091
DNA (1896bp) protein (632aa)
Carbon starvation protein CstA n=2 Tax=Geobacter metallireducens RepID=Q39RF8_GEOMG
carbon starvation protein CstA; K06200 carbon starvation protein Tax=CG_Nitrosp_01
cstA-1; carbon starvation protein CstA
cg_0.2_sub10_scaffold_134_c_10
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(9103..9603)
DNA (501bp) protein (167aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=4673959 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_134_c_11
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

9704..10579
DNA (876bp) protein (292aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17] Tax=CG_Nitrosp_01
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase id=4673960 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_134_c_12
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

10582..11640
DNA (1059bp) protein (353aa)
hisC1; histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=CG_Nitrosp_01
hisC1; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase id=4673961 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_134_c_13
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

11637..12224
DNA (588bp) protein (196aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=CG_Nitrosp_01
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
imidazoleglycerol-phosphate dehydratase id=4673962 bin=GWF2_Nitrospirae_44_13 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_134_c_14
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

12307..12540
DNA (234bp) protein (78aa)
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=CG_Nitrosp_01
HAD-superfamily hydrolase, subfamily IA, variant 3 id=4673963 bin=GWF2_Nitrospirae_44_13 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
HAD-superfamily hydrolase
cg_0.2_sub10_scaffold_134_c_15
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

12541..14133
DNA (1593bp) protein (531aa)
nadB; L-aspartate oxidase (EC:1.4.3.16); K00278 L-aspartate oxidase [EC:1.4.3.16] Tax=CG_Nitrosp_01
nadB; L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase id=4673964 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_134_c_16
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

14431..14652
DNA (222bp) protein (74aa)
Putative uncharacterized protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=4394398 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_134_c_17
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

14649..15050
DNA (402bp) protein (134aa)
hypothetical protein; K07065 Tax=CG_Nitrosp_01
Putative uncharacterized protein id=4394396 bin=GWC2_CP_Nitrospirae-rel_42_7 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
nucleic acid-binding protein
cg_0.2_sub10_scaffold_134_c_18
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

15256..15561
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9I5_9ARCH
hypothetical protein Tax=CG_Nitrosp_01
hypothetical protein
cg_0.2_sub10_scaffold_134_c_19
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

15546..15776
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XCG0_9BACT
Uncharacterized protein Tax=CG_Nitrosp_01
cg_0.2_sub10_scaffold_134_c_20
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

15960..17381
DNA (1422bp) protein (474aa)
pyk; pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=CG_Nitrosp_01
pyk; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase id=4674007 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_134_c_21
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(17378..18724)
DNA (1347bp) protein (449aa)
nitrogen assimilation regulatory protein NtrX Tax=CG_Nitrosp_01
Nitrogen assimilation regulatory protein NtrX id=4674009 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
nitrogen assimilation regulatory protein NtrX
cg_0.2_sub10_scaffold_134_c_22
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(18744..20783)
DNA (2040bp) protein (680aa)
nitrogen regulation protein NtrY; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] Tax=CG_Nitrosp_01
Nitrogen regulation protein NtrY, putative id=4674011 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
nitrogen regulation protein NtrY
cg_0.2_sub10_scaffold_134_c_23
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(20780..21394)
DNA (615bp) protein (205aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=4674013 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_134_c_24
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

21511..21993
DNA (483bp) protein (161aa)
hypothetical protein; K09129 hypothetical protein Tax=CG_Nitrosp_01
Adenosine kinase id=4674016 bin=GWF2_Nitrospirae_44_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
adenosine kinase
cg_0.2_sub10_scaffold_134_c_25
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

22253..22588
DNA (336bp) protein (112aa)
sulfite reductase, dissimilatory-type gamma subunit (EC:1.8.99.3); K11179 tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] Tax=CG_Nitrosp_01
dissimilatory-type sulfite reductase subuit gamma (EC:1.8.99.3)
Sulfite reductase, dissimilatory-type gamma subunit id=3381307 bin=GWC2_ACD39_50_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_ACD39_50_8 organism_group=ACD39
cg_0.2_sub10_scaffold_134_c_26
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

22722..23306
DNA (585bp) protein (195aa)
hypothetical protein Tax=CG_Nitrosp_01
Uncharacterized protein id=4674024 bin=GWF2_Nitrospirae_44_13 species=Desulfitobacterium dehalogenans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_134_c_27
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

23303..24292
DNA (990bp) protein (330aa)
nitrate reductase gamma subunit Tax=CG_Nitrosp_01
Hdr-like menaquinol oxidoreductase cytochrome b-like subunit id=4674026 bin=GWF2_Nitrospirae_44_13 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
nitrate reductase subunit gamma
cg_0.2_sub10_scaffold_134_c_28
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

24296..25912
DNA (1617bp) protein (539aa)
4Fe-4S ferredoxin Tax=CG_Nitrosp_01
4Fe-4S ferredoxin, iron-sulfur binding id=4674028 bin=GWF2_Nitrospirae_44_13 species=unknown genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
4Fe-4S ferredoxin
cg_0.2_sub10_scaffold_134_c_29
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

25912..26328
DNA (417bp) protein (139aa)
cytochrome c family protein Tax=CG_Nitrosp_01
Cytochrome c family protein id=4674029 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cytochrome c family protein
cg_0.2_sub10_scaffold_134_c_30
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

26325..27161
DNA (837bp) protein (279aa)
Fe-S-cluster-containing hydrogenase subunit Tax=CG_Nitrosp_01
Hdr-like menaquinol oxidoreductase iron-sulfur subunit 1 id=4674030 bin=GWF2_Nitrospirae_44_13 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Fe-S-cluster-containing hydrogenase subunit
Displaying items 1-30 of 52 in total

View Taxonomy