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cg_0.2_sub10_scaffold_543_c

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_543_c_1
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

62..274
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SM62_9DELT
hypothetical protein Tax=CG_Nitrosp_01
hypothetical protein
cg_0.2_sub10_scaffold_543_c_2
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

394..591
DNA (198bp) protein (66aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=1999239 bin=GWB2_Nitrospirae_rel_47_37 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
cg_0.2_sub10_scaffold_543_c_3
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(691..3156)
DNA (2466bp) protein (822aa)
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC Tax=CG_Nitrosp_01
DNA internalization-related competence protein ComEC/Rec2 id=4044051 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
DNA internalization-related competence protein ComEC/Rec2
cg_0.2_sub10_scaffold_543_c_4
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(3173..4516)
DNA (1344bp) protein (448aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10) Tax=CG_Nitrosp_01
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase id=4044057 bin=GWF2_Nitrospirae_44_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_543_c_5
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(4652..5293)
DNA (642bp) protein (214aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=4044061 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_543_c_6
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(5290..6078)
DNA (789bp) protein (263aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=4044118 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_543_c_7
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(6080..6559)
DNA (480bp) protein (160aa)
putative ComE operon protein 2 Tax=CG_Nitrosp_01
Putative ComE operon protein 2 id=4044121 bin=GWF2_Nitrospirae_44_13 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
putative ComE operon protein 2
cg_0.2_sub10_scaffold_543_c_8
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(6759..7553)
DNA (795bp) protein (265aa)
ABC transporter permease; K09816 zinc transport system permease protein Tax=CG_Nitrosp_01
ABC-type transporter, integral membrane subunit id=4044123 bin=GWF2_Nitrospirae_44_13 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
ABC transporter permease
cg_0.2_sub10_scaffold_543_c_9
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(7553..8323)
DNA (771bp) protein (257aa)
ABC transporter; K09817 zinc transport system ATP-binding protein [EC:3.6.3.-] Tax=CG_Nitrosp_01
Manganese transport system ATP-binding protein MntA id=4044125 bin=GWF2_Nitrospirae_44_13 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
ABC transporter
cg_0.2_sub10_scaffold_543_c_10
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(8320..9222)
DNA (903bp) protein (301aa)
metal ABC transporter substrate-binding protein; K09815 zinc transport system substrate-binding protein Tax=CG_Nitrosp_01
Periplasmic solute binding protein id=4044127 bin=GWF2_Nitrospirae_44_13 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
metal ABC transporter substrate-binding protein
cg_0.2_sub10_scaffold_543_c_11
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

9296..10498
DNA (1203bp) protein (401aa)
Permeases of the major facilitator superfamily id=4044130 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
permeases of the major facilitator superfamily Tax=GWF2_Nitrospirae_44_13_curated
major facilitator superfamily permease
cg_0.2_sub10_scaffold_543_c_12
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

10533..11315
DNA (783bp) protein (261aa)
peptidase M22, glycoprotease Tax=CG_Nitrosp_01
Glycoprotein endopeptidase id=4044132 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
peptidase M22, glycoprotease
cg_0.2_sub10_scaffold_543_c_13
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

11297..11767
DNA (471bp) protein (157aa)
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=CG_Nitrosp_01
Ribosomal-protein-alanine acetyltransferase id=4044136 bin=GWF2_Nitrospirae_44_13 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
ribosomal-protein-alanine acetyltransferase
cg_0.2_sub10_scaffold_543_c_14
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(11764..12150)
DNA (387bp) protein (129aa)
DNA binding protein Tax=CG_Nitrosp_01
DNA binding protein id=4044137 bin=GWF2_Nitrospirae_44_13 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
DNA binding protein
cg_0.2_sub10_scaffold_543_c_15
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

12250..12612
DNA (363bp) protein (121aa)
response regulator receiver protein Tax=CG_Nitrosp_01
Putative sensor histidine kinase/response regulator RcsC id=4044138 bin=GWF2_Nitrospirae_44_13 species=Pseudomonas chlororaphis genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
histidine kinase
cg_0.2_sub10_scaffold_543_c_16
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(12609..13583)
DNA (975bp) protein (325aa)
rfaE; RfaE bifunctional protein, domain I (EC:2.7.1.-) Tax=CG_Nitrosp_01
rfaE; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (EC:2.7.1.-)
RfaE bifunctional protein, domain I id=4044139 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_543_c_17
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(13616..15019)
DNA (1404bp) protein (468aa)
L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Tax=CG_Nitrosp_01
L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase id=3967290 bin=GWF2_Nitrospirae_44_13 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_543_c_18
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15673..16533
DNA (861bp) protein (287aa)
Putative redox-active protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
Chain A, iron Centre cytochrome c protein id=4329500 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
chain A, iron Centre cytochrome c protein
cg_0.2_sub10_scaffold_543_c_19
unknown

Not on your lists

16737..16931
DNA (195bp) protein (65aa)

This feature has no annotations

cg_0.2_sub10_scaffold_543_c_20
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

Not on your lists

16943..17152
DNA (210bp) protein (70aa)
Outer membrane transport energization protein TonB id=4190698 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
TonB family protein; K03832 periplasmic protein TonB Tax=GWC2_Nitrospirae_42_7_curated
TonB family protein
cg_0.2_sub10_scaffold_543_c_21
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

17153..17584
DNA (432bp) protein (144aa)
Putative uncharacterized protein id=1835646 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Putative uncharacterized protein Tax=GWB2_Nitrospirae_47_37_curated
membrane protein
cg_0.2_sub10_scaffold_543_c_22
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(17660..18052)
DNA (393bp) protein (131aa)
Ribonuclease VapC n=1 Tax=planctomycete KSU-1 RepID=I3IKE8_9PLAN
PilT protein domain-containing protein; K07062 Tax=RBG_13_Nitrospirae_43_8_curated
PilT protein domain-containing protein
cg_0.2_sub10_scaffold_543_c_23
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(18049..18288)
DNA (240bp) protein (80aa)
Marine sediment metagenome DNA, contig: S03H2_L01841 Tax=RBG_13_Nitrospirae_43_8_curated
Displaying 23 items

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